Factsheet for VIT_18s0089g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol, nucleus, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00280.t01	Wine grape	mitochondrion	45.33	62.96
Bra030431.1-P	Field mustard	cytosol	45.33	60.71
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	56.0	58.33
VIT_19s0014g04520.t01	Wine grape	cytosol	37.33	57.14
GSMUA_Achr2P05010_001	Banana	cytosol	40.0	53.57
Bra014294.1-P	Field mustard	mitochondrion	46.67	50.0
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	46.67	50.0
CDY46549	Canola	mitochondrion	46.67	50.0
PGSC0003DMT400023749	Potato	mitochondrion, plastid	45.33	48.57
Solyc06g063220.2.1	Tomato	plastid	45.33	48.57
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	45.33	48.57
CDY32413	Canola	plastid	45.33	48.57
CDX82211	Canola	plastid	45.33	48.57
EES01052	Sorghum	mitochondrion	44.0	47.83
TraesCS3B01G326400.1	Wheat	plastid	40.0	47.62
TraesCS3A01G291800.1	Wheat	mitochondrion	40.0	47.62
Bra023896.1-P	Field mustard	mitochondrion	45.33	47.22
PGSC0003DMT400074206	Potato	mitochondrion, plastid	44.0	47.14
Zm00001d044441_P002	Maize	mitochondrion	44.0	47.14
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.0	47.14
Zm00001d011314_P001	Maize	mitochondrion	45.33	46.58
CDY02587	Canola	endoplasmic reticulum, extracellular	45.33	46.58
PGSC0003DMT400068159	Potato	mitochondrion	42.67	45.71
Solyc12g055760.1.1	Tomato	plastid	42.67	45.71
KRH44639	Soybean	mitochondrion	40.0	45.45
CDY37308	Canola	mitochondrion, plastid	44.0	45.21
TraesCS3D01G291500.1	Wheat	mitochondrion	41.33	44.93
CDY27534	Canola	mitochondrion, plastid	41.33	44.29
GSMUA_Achr9P19600_001	Banana	mitochondrion	40.0	42.25
Os08t0250200-01	Rice	mitochondrion	38.67	42.03
KRH47013	Soybean	mitochondrion	38.67	41.43
HORVU1Hr1G030420.1	Barley	mitochondrion	33.33	39.68
TraesCS5B01G015000.1	Wheat	mitochondrion	36.0	39.13
TraesCS5A01G017000.1	Wheat	mitochondrion	34.67	37.68
HORVU5Hr1G004830.5	Barley	mitochondrion	34.67	30.23
GSMUA_Achr1P15900_001	Banana	plastid	42.67	24.81
CDX98292	Canola	cytosol	44.0	20.0

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	ProteinID:CCB44145	ProteinID:CCB44145.1
UniProt:F6GW10	EMBL:FN594956	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0046933	GO:GO:0099132
InterPro:IPR036742	PFAM:PF04627	PANTHER:PTHR12448	SUPFAM:SSF48690	UniParc:UPI00021094F3	ArrayExpress:VIT_18s0089g00420
EnsemblPlantsGene:VIT_18s0089g00420	EnsemblPlants:VIT_18s0089g00420.t01	:	:	:	:

Description

No Description!

Coordinates

chr18:-:28239850..28240864

Molecular Weight (calculated)

9021.9 Da

IEP (calculated)

10.205

GRAVY (calculated)

-0.783

Length

75 amino acids

Sequence
(BLAST)

1: MTYISYSNIY ANLVRNCLKK PFKSEDLTHE KVHFSISKWD NGVPQKPSFH QRTSAHCHQL YICLWRNNRK KELIK

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.