Factsheet for Zm00001d044441_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01052	Sorghum	mitochondrion	94.29	95.65
Os08t0250200-01	Rice	mitochondrion	87.14	88.41
Zm00001d011314_P001	Maize	mitochondrion	90.0	86.3
TraesCS3B01G326400.1	Wheat	plastid	74.29	82.54
TraesCS3A01G291800.1	Wheat	mitochondrion	72.86	80.95
VIT_10s0092g00280.t01	Wine grape	mitochondrion	60.0	77.78
Bra014294.1-P	Field mustard	mitochondrion	75.71	75.71
CDY46549	Canola	mitochondrion	75.71	75.71
TraesCS3D01G291500.1	Wheat	mitochondrion	74.29	75.36
CDY32413	Canola	plastid	72.86	72.86
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.86	72.86
CDX82211	Canola	plastid	72.86	72.86
Solyc06g063220.2.1	Tomato	plastid	72.86	72.86
KRH44639	Soybean	mitochondrion	68.57	72.73
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.43	71.43
TraesCS5A01G017000.1	Wheat	mitochondrion	70.0	71.01
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.0	70.0
CDY27534	Canola	mitochondrion, plastid	70.0	70.0
PGSC0003DMT400074206	Potato	mitochondrion, plastid	70.0	70.0
Bra030431.1-P	Field mustard	cytosol	55.71	69.64
GSMUA_Achr2P05010_001	Banana	cytosol	55.71	69.64
TraesCS5B01G015000.1	Wheat	mitochondrion	68.57	69.57
PGSC0003DMT400023749	Potato	mitochondrion, plastid	68.57	68.57
PGSC0003DMT400068159	Potato	mitochondrion	68.57	68.57
Solyc12g055760.1.1	Tomato	plastid	68.57	68.57
HORVU1Hr1G030420.1	Barley	mitochondrion	61.43	68.25
KRH47013	Soybean	mitochondrion	67.14	67.14
CDY37308	Canola	mitochondrion, plastid	70.0	67.12
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	68.57	66.67
Bra023896.1-P	Field mustard	mitochondrion	68.57	66.67
GSMUA_Achr9P19600_001	Banana	mitochondrion	67.14	66.2
CDY02587	Canola	endoplasmic reticulum, extracellular	67.14	64.38
VIT_19s0014g04520.t01	Wine grape	cytosol	42.86	61.22
HORVU5Hr1G004830.5	Barley	mitochondrion	65.71	53.49
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	47.14	44.0
GSMUA_Achr1P15900_001	Banana	plastid	64.29	34.88
CDX98292	Canola	cytosol	65.71	27.88

Protein Annotations

Gene3D:1.10.1620.20	EntrezGene:100283198	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	UniProt:B6TF45
EMBL:EU963610	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261
GO:GO:0046933	GO:GO:0099132	InterPro:IPR036742	ProteinID:ONM41166.1	PFAM:PF04627	PANTHER:PTHR12448
PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI000182DD96	EnsemblPlantsGene:Zm00001d044441	EnsemblPlants:Zm00001d044441_P002	EnsemblPlants:Zm00001d044441_T002

Description

ATP synthase epsilon chain%2C mitochondrial

Coordinates

chr3:+:228211851..228213968

Molecular Weight (calculated)

7800.2 Da

IEP (calculated)

8.750

GRAVY (calculated)

-0.457

Length

70 amino acids

Sequence
(BLAST)

1: MSATTAAVPF WRAAGMTYIG YSNICAALVR NCLKEPFKSE AASREKVHFS ISKWTDGKQE KPTVRTESDE

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.