Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82211 | Canola | plastid | 32.12 | 75.71 |
| CDY32413 | Canola | plastid | 32.12 | 75.71 |
| CDY27534 | Canola | mitochondrion, plastid | 30.3 | 71.43 |
| CDY46549 | Canola | mitochondrion | 30.3 | 71.43 |
| CDY02587 | Canola | endoplasmic reticulum, extracellular | 31.52 | 71.23 |
| CDY43919 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.7 | 70.0 |
| CDY37308 | Canola | mitochondrion, plastid | 30.91 | 69.86 |
| CDX87828 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.09 | 68.57 |
| AT1G51650.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.09 | 68.57 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 22.42 | 68.52 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 26.06 | 68.25 |
| EES01052 | Sorghum | mitochondrion | 28.48 | 68.12 |
| TraesCS3B01G326400.1 | Wheat | plastid | 25.45 | 66.67 |
| Zm00001d044441_P002 | Maize | mitochondrion | 27.88 | 65.71 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 27.27 | 64.29 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 26.67 | 63.77 |
| Zm00001d011314_P001 | Maize | mitochondrion | 27.88 | 63.01 |
| Solyc12g055760.1.1 | Tomato | plastid | 26.67 | 62.86 |
| Solyc06g063220.2.1 | Tomato | plastid | 26.67 | 62.86 |
| Os08t0250200-01 | Rice | mitochondrion | 26.06 | 62.32 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 20.61 | 60.71 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 26.06 | 60.56 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 25.45 | 60.0 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 26.06 | 59.72 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 24.85 | 58.57 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 21.21 | 55.56 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 23.03 | 55.07 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 22.42 | 53.62 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 15.15 | 51.02 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 20.0 | 44.0 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 22.42 | 43.02 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 26.67 | 34.11 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | GO:A0A078EBA5 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt | EnsemblPlants:CDX98292 |
| ProteinID:CDX98292 | ProteinID:CDX98292.1 | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | EnsemblPlantsGene:GSBRNA2T00105829001 | InterPro:IPR036742 | PFAM:PF04627 |
| PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | UniParc:UPI0004EDD916 | SEG:seg | : |
Description
BnaC06g16530D
Coordinates
chrLK031904:+:401269..402852
Molecular Weight (calculated)
18504.8 Da
IEP (calculated)
8.904
GRAVY (calculated)
-0.479
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKYTAHES QGFLNKNRTA ELKEETGTEL EESKGVTIII ADGFYSTCQL STSSSSQSPR LDRSNSEMAS TAAAVPFWRA VGMTYITYSN ICANRVRNCL
101: KEPFKAESMS SEKVHFSLSR WADGKPHKPG SWHELFITAL ELYSGSLPPR RSHGKLSTLC RYHFL
101: KEPFKAESMS SEKVHFSLSR WADGKPHKPG SWHELFITAL ELYSGSLPPR RSHGKLSTLC RYHFL
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,mitochondrion,plastid]
SUBAcon: [extracellular,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.