Factsheet for VIT_19s0014g04520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00280.t01	Wine grape	mitochondrion	63.27	57.41
Bra030431.1-P	Field mustard	cytosol	63.27	55.36
GSMUA_Achr2P05010_001	Banana	cytosol	55.1	48.21
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	67.35	45.83
Bra014294.1-P	Field mustard	mitochondrion	65.31	45.71
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.31	45.71
CDY46549	Canola	mitochondrion	65.31	45.71
PGSC0003DMT400023749	Potato	mitochondrion, plastid	63.27	44.29
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.27	44.29
EES01052	Sorghum	mitochondrion	61.22	43.48
Zm00001d044441_P002	Maize	mitochondrion	61.22	42.86
Solyc06g063220.2.1	Tomato	plastid	61.22	42.86
PGSC0003DMT400074206	Potato	mitochondrion, plastid	61.22	42.86
CDY32413	Canola	plastid	61.22	42.86
CDX82211	Canola	plastid	61.22	42.86
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.22	42.86
KRH44639	Soybean	mitochondrion	57.14	42.42
PGSC0003DMT400068159	Potato	mitochondrion	59.18	41.43
Solyc12g055760.1.1	Tomato	plastid	57.14	40.0
CDY27534	Canola	mitochondrion, plastid	57.14	40.0
CDY37308	Canola	mitochondrion, plastid	59.18	39.73
Zm00001d011314_P001	Maize	mitochondrion	59.18	39.73
TraesCS3A01G291800.1	Wheat	mitochondrion	51.02	39.68
TraesCS3B01G326400.1	Wheat	plastid	51.02	39.68
Os08t0250200-01	Rice	mitochondrion	55.1	39.13
KRH47013	Soybean	mitochondrion	55.1	38.57
HORVU1Hr1G030420.1	Barley	mitochondrion	48.98	38.1
TraesCS3D01G291500.1	Wheat	mitochondrion	53.06	37.68
Bra023896.1-P	Field mustard	mitochondrion	55.1	37.5
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	57.14	37.33
GSMUA_Achr9P19600_001	Banana	mitochondrion	53.06	36.62
CDY02587	Canola	endoplasmic reticulum, extracellular	53.06	35.62
TraesCS5B01G015000.1	Wheat	mitochondrion	46.94	33.33
TraesCS5A01G017000.1	Wheat	mitochondrion	44.9	31.88
HORVU5Hr1G004830.5	Barley	mitochondrion	48.98	27.91
GSMUA_Achr1P15900_001	Banana	plastid	51.02	19.38
CDX98292	Canola	cytosol	51.02	15.15

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	ProteinID:CCB46439	ProteinID:CCB46439.1
ncoils:Coil	UniProt:F6H2B9	EMBL:FN595229	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0046933
GO:GO:0099132	InterPro:IPR036742	PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690
UniParc:UPI000210811C	ArrayExpress:VIT_19s0014g04520	EnsemblPlantsGene:VIT_19s0014g04520	EnsemblPlants:VIT_19s0014g04520.t01	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:4833693..4836694

Molecular Weight (calculated)

5853.1 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.822

Length

49 amino acids

Sequence
(BLAST)

1: MMYISYSNIC ANLVRNCLKE PFKSEALTRE KVSKKKEEDD EELETLLRR

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [endoplasmic reticulum,mitochondrion,plasma membrane,vacuole,golgi,plastid,cytosol,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.