CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47013	Soybean	mitochondrion	90.91	85.71
CDY46549	Canola	mitochondrion	84.85	80.0
Bra014294.1-P	Field mustard	mitochondrion	83.33	78.57
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	81.82	77.14
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	81.82	77.14
Bra030431.1-P	Field mustard	cytosol	63.64	75.0
PGSC0003DMT400074206	Potato	mitochondrion, plastid	78.79	74.29
Solyc12g055760.1.1	Tomato	plastid	77.27	72.86
Solyc06g063220.2.1	Tomato	plastid	77.27	72.86
PGSC0003DMT400023749	Potato	mitochondrion, plastid	75.76	71.43
VIT_10s0092g00280.t01	Wine grape	mitochondrion	57.58	70.37
GSMUA_Achr2P05010_001	Banana	cytosol	59.09	69.64
Zm00001d044441_P002	Maize	mitochondrion	72.73	68.57
PGSC0003DMT400068159	Potato	mitochondrion	72.73	68.57
TraesCS3A01G291800.1	Wheat	mitochondrion	65.15	68.25
TraesCS3B01G326400.1	Wheat	plastid	65.15	68.25
EES01052	Sorghum	mitochondrion	71.21	68.12
Os08t0250200-01	Rice	mitochondrion	69.7	66.67
Zm00001d011314_P001	Maize	mitochondrion	71.21	64.38
TraesCS3D01G291500.1	Wheat	mitochondrion	66.67	63.77
GSMUA_Achr9P19600_001	Banana	mitochondrion	66.67	61.97
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	66.67	61.11
VIT_19s0014g04520.t01	Wine grape	cytosol	42.42	57.14
TraesCS5B01G015000.1	Wheat	mitochondrion	59.09	56.52
TraesCS5A01G017000.1	Wheat	mitochondrion	57.58	55.07
HORVU1Hr1G030420.1	Barley	mitochondrion	51.52	53.97
HORVU5Hr1G004830.5	Barley	mitochondrion	57.58	44.19
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	45.45	40.0
GSMUA_Achr1P15900_001	Banana	plastid	66.67	34.11

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	EMBL:ACUP02004945	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	EnsemblPlantsGene:GLYMA_08G222900
GO:GO:0000275	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787
GO:GO:0046933	GO:GO:0099132	UniProt:I1KVS3	InterPro:IPR036742	EnsemblPlants:KRH44639	ProteinID:KRH44639
ProteinID:KRH44639.1	PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI00023C60A5

Description

hypothetical protein

Coordinates

chr8:+:18089178..18090423

Molecular Weight (calculated)

7416.9 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.408

Length

66 amino acids

Sequence
(BLAST)

1: MASSGAVPFW RAAGMTYITY SNICANLVRN CLKEPYKAEA ISREKVHFAL SKWVDAKPEK PNTPEQ

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.