CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44639	Soybean	mitochondrion	85.71	90.91
CDY46549	Canola	mitochondrion	81.43	81.43
Bra014294.1-P	Field mustard	mitochondrion	80.0	80.0
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.14	77.14
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.14	77.14
Solyc12g055760.1.1	Tomato	plastid	77.14	77.14
Solyc06g063220.2.1	Tomato	plastid	77.14	77.14
PGSC0003DMT400074206	Potato	mitochondrion, plastid	77.14	77.14
PGSC0003DMT400023749	Potato	mitochondrion, plastid	75.71	75.71
Bra030431.1-P	Field mustard	cytosol	60.0	75.0
PGSC0003DMT400068159	Potato	mitochondrion	71.43	71.43
GSMUA_Achr2P05010_001	Banana	cytosol	57.14	71.43
Zm00001d044441_P002	Maize	mitochondrion	67.14	67.14
VIT_10s0092g00280.t01	Wine grape	mitochondrion	51.43	66.67
EES01052	Sorghum	mitochondrion	65.71	66.67
TraesCS3B01G326400.1	Wheat	plastid	58.57	65.08
TraesCS3A01G291800.1	Wheat	mitochondrion	58.57	65.08
Os08t0250200-01	Rice	mitochondrion	62.86	63.77
TraesCS3D01G291500.1	Wheat	mitochondrion	61.43	62.32
GSMUA_Achr9P19600_001	Banana	mitochondrion	62.86	61.97
Zm00001d011314_P001	Maize	mitochondrion	64.29	61.64
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	61.43	59.72
TraesCS5B01G015000.1	Wheat	mitochondrion	55.71	56.52
VIT_19s0014g04520.t01	Wine grape	cytosol	38.57	55.1
TraesCS5A01G017000.1	Wheat	mitochondrion	54.29	55.07
HORVU1Hr1G030420.1	Barley	mitochondrion	45.71	50.79
HORVU5Hr1G004830.5	Barley	mitochondrion	51.43	41.86
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	41.43	38.67
GSMUA_Achr1P15900_001	Banana	plastid	61.43	33.33

Protein Annotations

Gene3D:1.10.1620.20	EntrezGene:100306025	MapMan:2.4.6.2.6	EMBL:ACUP02004132	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt
EMBL:BT089926	UniProt:C6SXM9	EnsemblPlantsGene:GLYMA_07G003700	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0046933
GO:GO:0099132	InterPro:IPR036742	EnsemblPlants:KRH47013	ProteinID:KRH47013	ProteinID:KRH47013.1	PFAM:PF04627
PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI0001B153F8	:	:

Description

hypothetical protein

Coordinates

chr7:-:281724..282948

Molecular Weight (calculated)

7947.5 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.430

Length

70 amino acids

Sequence
(BLAST)

1: MASSGAVPFW RAAGMTYITY SNICANLLRN CLKEPYKAES LSREKLHFVL SKWVDAKPEK PTIRSDTPEQ

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.