Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014294.1-P | Field mustard | mitochondrion | 98.57 | 98.57 |
| CDY43919 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 91.43 | 91.43 |
| CDX87828 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 90.0 | 90.0 |
| CDX82211 | Canola | plastid | 88.57 | 88.57 |
| CDY32413 | Canola | plastid | 88.57 | 88.57 |
| CDY27534 | Canola | mitochondrion, plastid | 85.71 | 85.71 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 85.71 | 85.71 |
| KRH44639 | Soybean | mitochondrion | 80.0 | 84.85 |
| Solyc12g055760.1.1 | Tomato | plastid | 82.86 | 82.86 |
| CDY37308 | Canola | mitochondrion, plastid | 85.71 | 82.19 |
| Solyc06g063220.2.1 | Tomato | plastid | 81.43 | 81.43 |
| KRH47013 | Soybean | mitochondrion | 81.43 | 81.43 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 80.0 | 80.0 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 61.43 | 79.63 |
| EES01052 | Sorghum | mitochondrion | 77.14 | 78.26 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 77.14 | 77.14 |
| Zm00001d044441_P002 | Maize | mitochondrion | 75.71 | 75.71 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 60.0 | 75.0 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 65.71 | 73.02 |
| Os08t0250200-01 | Rice | mitochondrion | 71.43 | 72.46 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 74.29 | 72.22 |
| TraesCS3B01G326400.1 | Wheat | plastid | 64.29 | 71.43 |
| Zm00001d011314_P001 | Maize | mitochondrion | 74.29 | 71.23 |
| CDY02587 | Canola | endoplasmic reticulum, extracellular | 74.29 | 71.23 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 67.14 | 68.12 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 68.57 | 67.61 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 45.71 | 65.31 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 58.57 | 59.42 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 57.14 | 57.97 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 51.43 | 57.14 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 50.0 | 46.67 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 57.14 | 46.51 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 67.14 | 36.43 |
| CDX98292 | Canola | cytosol | 71.43 | 30.3 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | GO:A0A078IB68 | UniProt:A0A078IB68 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt |
| EnsemblPlants:CDY46549 | ProteinID:CDY46549 | ProteinID:CDY46549.1 | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | GO:GO:0099132 | EnsemblPlantsGene:GSBRNA2T00085766001 |
| InterPro:IPR036742 | PFAM:PF04627 | PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | UniParc:UPI0004EDE24E |
Description
BnaA08g01880DBnaA08g01880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB68]
Coordinates
chrLK032675:-:102380..103269
Molecular Weight (calculated)
7758.4 Da
IEP (calculated)
9.774
GRAVY (calculated)
-0.200
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSAAVPFW RAAGMTYITY SNICANLVRN CLKEPFKAEA LSREKVHFSI SKWADGKPEK PILRSDTPGV
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.