CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044441_P002	Maize	mitochondrion	95.65	94.29
Os08t0250200-01	Rice	mitochondrion	92.75	92.75
Zm00001d011314_P001	Maize	mitochondrion	89.86	84.93
TraesCS3A01G291800.1	Wheat	mitochondrion	75.36	82.54
TraesCS3B01G326400.1	Wheat	plastid	73.91	80.95
VIT_10s0092g00280.t01	Wine grape	mitochondrion	60.87	77.78
Bra014294.1-P	Field mustard	mitochondrion	78.26	77.14
CDY46549	Canola	mitochondrion	78.26	77.14
TraesCS3D01G291500.1	Wheat	mitochondrion	76.81	76.81
CDY32413	Canola	plastid	75.36	74.29
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.36	74.29
CDX82211	Canola	plastid	75.36	74.29
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.91	72.86
TraesCS5A01G017000.1	Wheat	mitochondrion	72.46	72.46
Bra030431.1-P	Field mustard	cytosol	57.97	71.43
Solyc06g063220.2.1	Tomato	plastid	72.46	71.43
KRH44639	Soybean	mitochondrion	68.12	71.21
TraesCS5B01G015000.1	Wheat	mitochondrion	71.01	71.01
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.01	70.0
CDY27534	Canola	mitochondrion, plastid	71.01	70.0
PGSC0003DMT400074206	Potato	mitochondrion, plastid	71.01	70.0
PGSC0003DMT400023749	Potato	mitochondrion, plastid	69.57	68.57
PGSC0003DMT400068159	Potato	mitochondrion	69.57	68.57
Solyc12g055760.1.1	Tomato	plastid	69.57	68.57
HORVU1Hr1G030420.1	Barley	mitochondrion	62.32	68.25
Bra023896.1-P	Field mustard	mitochondrion	71.01	68.06
GSMUA_Achr2P05010_001	Banana	cytosol	55.07	67.86
CDY37308	Canola	mitochondrion, plastid	71.01	67.12
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	69.57	66.67
GSMUA_Achr9P19600_001	Banana	mitochondrion	68.12	66.2
CDY02587	Canola	endoplasmic reticulum, extracellular	69.57	65.75
KRH47013	Soybean	mitochondrion	66.67	65.71
VIT_19s0014g04520.t01	Wine grape	cytosol	43.48	61.22
HORVU5Hr1G004830.5	Barley	mitochondrion	66.67	53.49
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	47.83	44.0
GSMUA_Achr1P15900_001	Banana	plastid	66.67	35.66
CDX98292	Canola	cytosol	68.12	28.48

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	EntrezGene:8054361	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	UniProt:C5XQE3
EnsemblPlants:EES01052	ProteinID:EES01052	ProteinID:EES01052.1	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0005753	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
GO:GO:0046933	GO:GO:0099132	InterPro:IPR036742	PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0
EnsemblPlantsGene:SORBI_3003G215700	SUPFAM:SSF48690	unigene:Sbi.6100	UniParc:UPI0001A84A15	RefSeq:XP_002455932.1	:

Description

hypothetical protein

Coordinates

chr3:+:55064283..55067374

Molecular Weight (calculated)

7683.1 Da

IEP (calculated)

8.750

GRAVY (calculated)

-0.416

Length

69 amino acids

Sequence
(BLAST)

1: MSATTAAVPF WRAAGMTYIG YSNICAALVR NCLKEPFKSE AASREKVHFS ISKWADGKQE KPTVRTEDE

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.