Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27534 | Canola | mitochondrion, plastid | 83.33 | 85.71 |
| CDY37308 | Canola | mitochondrion, plastid | 86.11 | 84.93 |
| Bra014294.1-P | Field mustard | mitochondrion | 76.39 | 78.57 |
| AT1G51650.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 75.0 | 77.14 |
| Bra030431.1-P | Field mustard | cytosol | 59.72 | 76.79 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 65.28 | 74.6 |
| TraesCS3B01G326400.1 | Wheat | plastid | 63.89 | 73.02 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 70.83 | 72.86 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 54.17 | 72.22 |
| Solyc12g055760.1.1 | Tomato | plastid | 69.44 | 71.43 |
| Solyc06g063220.2.1 | Tomato | plastid | 69.44 | 71.43 |
| EES01052 | Sorghum | mitochondrion | 68.06 | 71.01 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 68.06 | 70.0 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 66.67 | 69.57 |
| Zm00001d044441_P002 | Maize | mitochondrion | 66.67 | 68.57 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 65.28 | 67.14 |
| Zm00001d011314_P001 | Maize | mitochondrion | 68.06 | 67.12 |
| Os08t0250200-01 | Rice | mitochondrion | 63.89 | 66.67 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 65.28 | 65.28 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 50.0 | 64.29 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 59.72 | 60.56 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 54.17 | 56.52 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 48.61 | 55.56 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 37.5 | 55.1 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 52.78 | 55.07 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 47.22 | 45.33 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 52.78 | 44.19 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 62.5 | 34.88 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt | EnsemblPlantsGene:Bra023896 | EnsemblPlants:Bra023896.1 |
| EnsemblPlants:Bra023896.1-P | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005753 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | GO:GO:0099132 | InterPro:IPR036742 | UniProt:M4E542 |
| PFAM:PF04627 | PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | UniParc:UPI000254470C | SEG:seg |
Description
AT1G51650 (E=9e-028) | ATP synthase epsilon chain, mitochondrial
Coordinates
chrA01:-:20895465..20895837
Molecular Weight (calculated)
8210.0 Da
IEP (calculated)
10.329
GRAVY (calculated)
-0.003
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSAAVPFW RAAGMTYITY SNICANLVRK CLKEPFKAES MNREKVHFSL SKWADGKPQK PGFFFFFTLL PV
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.