Factsheet for GSMUA_Achr9P19600_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05010_001	Banana	cytosol	67.61	85.71
Solyc06g063220.2.1	Tomato	plastid	69.01	70.0
Bra014294.1-P	Field mustard	mitochondrion	67.61	68.57
CDY46549	Canola	mitochondrion	67.61	68.57
TraesCS3A01G291800.1	Wheat	mitochondrion	60.56	68.25
Os08t0250200-01	Rice	mitochondrion	66.2	68.12
EES01052	Sorghum	mitochondrion	66.2	68.12
Zm00001d044441_P002	Maize	mitochondrion	66.2	67.14
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.2	67.14
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.2	67.14
VIT_10s0092g00280.t01	Wine grape	mitochondrion	50.7	66.67
TraesCS3B01G326400.1	Wheat	plastid	59.15	66.67
KRH44639	Soybean	mitochondrion	61.97	66.67
Bra030431.1-P	Field mustard	cytosol	52.11	66.07
CDY32413	Canola	plastid	64.79	65.71
CDX82211	Canola	plastid	64.79	65.71
PGSC0003DMT400023749	Potato	mitochondrion, plastid	64.79	65.71
Zm00001d011314_P001	Maize	mitochondrion	66.2	64.38
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.38	64.29
CDY27534	Canola	mitochondrion, plastid	63.38	64.29
PGSC0003DMT400074206	Potato	mitochondrion, plastid	61.97	62.86
Solyc12g055760.1.1	Tomato	plastid	61.97	62.86
PGSC0003DMT400068159	Potato	mitochondrion	61.97	62.86
KRH47013	Soybean	mitochondrion	61.97	62.86
TraesCS5A01G017000.1	Wheat	mitochondrion	60.56	62.32
CDY37308	Canola	mitochondrion, plastid	63.38	61.64
TraesCS3D01G291500.1	Wheat	mitochondrion	59.15	60.87
TraesCS5B01G015000.1	Wheat	mitochondrion	59.15	60.87
HORVU1Hr1G030420.1	Barley	mitochondrion	53.52	60.32
Bra023896.1-P	Field mustard	mitochondrion	60.56	59.72
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	60.56	59.72
CDY02587	Canola	endoplasmic reticulum, extracellular	54.93	53.42
VIT_19s0014g04520.t01	Wine grape	cytosol	36.62	53.06
HORVU5Hr1G004830.5	Barley	mitochondrion	59.15	48.84
GSMUA_Achr1P15900_001	Banana	plastid	73.24	40.31
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	42.25	40.0
CDX98292	Canola	cytosol	60.56	26.06

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0046933	GO:GO:0099132
EnsemblPlantsGene:GSMUA_Achr9G19600_001	EnsemblPlants:GSMUA_Achr9P19600_001	EnsemblPlants:GSMUA_Achr9T19600_001	InterPro:IPR036742	UniProt:M0U1R7	PFAM:PF04627
PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI000296327F	:	:

Description

ATP synthase subunit epsilon, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr9G19600_001]

Coordinates

chr9:+:21724519..21738184

Molecular Weight (calculated)

7794.3 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.269

Length

71 amino acids

Sequence
(BLAST)

1: MASMAAAVPF WRAAGMTYIT YSNICASLVR GCLKEPYRSE AAAREKVHFA VSKWANGKPE KSSIRSDSHA E

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.