Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43919 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 97.14 | 97.14 |
| Bra030431.1-P | Field mustard | cytosol | 77.14 | 96.43 |
| CDY46549 | Canola | mitochondrion | 90.0 | 90.0 |
| CDX82211 | Canola | plastid | 85.71 | 85.71 |
| CDY27534 | Canola | mitochondrion, plastid | 85.71 | 85.71 |
| CDY32413 | Canola | plastid | 85.71 | 85.71 |
| CDY37308 | Canola | mitochondrion, plastid | 85.71 | 82.19 |
| KRH44639 | Soybean | mitochondrion | 77.14 | 81.82 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 80.0 | 80.0 |
| KRH47013 | Soybean | mitochondrion | 77.14 | 77.14 |
| Solyc12g055760.1.1 | Tomato | plastid | 77.14 | 77.14 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 58.57 | 75.93 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 75.71 | 75.71 |
| Solyc06g063220.2.1 | Tomato | plastid | 75.71 | 75.71 |
| EES01052 | Sorghum | mitochondrion | 72.86 | 73.91 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 71.43 | 71.43 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 64.29 | 71.43 |
| Zm00001d044441_P002 | Maize | mitochondrion | 71.43 | 71.43 |
| CDY02587 | Canola | endoplasmic reticulum, extracellular | 72.86 | 69.86 |
| TraesCS3B01G326400.1 | Wheat | plastid | 62.86 | 69.84 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 55.71 | 69.64 |
| Os08t0250200-01 | Rice | mitochondrion | 68.57 | 69.57 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 71.43 | 69.44 |
| Zm00001d011314_P001 | Maize | mitochondrion | 70.0 | 67.12 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 65.71 | 66.67 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 67.14 | 66.2 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 42.86 | 61.22 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 57.14 | 57.97 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 55.71 | 56.52 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 50.0 | 55.56 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 55.71 | 45.35 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 47.14 | 44.0 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 67.14 | 36.43 |
| CDX98292 | Canola | cytosol | 68.57 | 29.09 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | GO:A0A078DKR1 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt | EnsemblPlants:CDX87828 |
| ProteinID:CDX87828 | ProteinID:CDX87828.1 | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | EnsemblPlantsGene:GSBRNA2T00146987001 | InterPro:IPR036742 | PFAM:PF04627 |
| PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | UniParc:UPI0004EC2B50 | : | : |
Description
BnaC06g08900D
Coordinates
chrLK031852:+:413935..414981
Molecular Weight (calculated)
7707.4 Da
IEP (calculated)
10.120
GRAVY (calculated)
-0.189
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MASTAAVPFW RAAGMTYITY SNICANLVRN CLKEPLKAEA LNREKVHFSL SKWAGGKPEK PILRSDTPGV
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.