Factsheet for GSMUA_Achr1P15900_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19600_001	Banana	mitochondrion	40.31	73.24
TraesCS3A01G291800.1	Wheat	mitochondrion	34.88	71.43
GSMUA_Achr2P05010_001	Banana	cytosol	31.01	71.43
TraesCS3B01G326400.1	Wheat	plastid	34.11	69.84
Bra014294.1-P	Field mustard	mitochondrion	36.43	67.14
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.43	67.14
CDY46549	Canola	mitochondrion	36.43	67.14
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.43	67.14
KRH44639	Soybean	mitochondrion	34.11	66.67
VIT_10s0092g00280.t01	Wine grape	mitochondrion	27.91	66.67
Os08t0250200-01	Rice	mitochondrion	35.66	66.67
EES01052	Sorghum	mitochondrion	35.66	66.67
CDY32413	Canola	plastid	35.66	65.71
CDY27534	Canola	mitochondrion, plastid	35.66	65.71
CDX82211	Canola	plastid	35.66	65.71
TraesCS3D01G291500.1	Wheat	mitochondrion	34.88	65.22
Zm00001d044441_P002	Maize	mitochondrion	34.88	64.29
Bra030431.1-P	Field mustard	cytosol	27.91	64.29
Solyc06g063220.2.1	Tomato	plastid	34.88	64.29
CDY37308	Canola	mitochondrion, plastid	35.66	63.01
PGSC0003DMT400023749	Potato	mitochondrion, plastid	34.11	62.86
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.11	62.86
Bra023896.1-P	Field mustard	mitochondrion	34.88	62.5
Zm00001d011314_P001	Maize	mitochondrion	34.88	61.64
PGSC0003DMT400074206	Potato	mitochondrion, plastid	33.33	61.43
KRH47013	Soybean	mitochondrion	33.33	61.43
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	34.11	61.11
TraesCS5A01G017000.1	Wheat	mitochondrion	32.56	60.87
HORVU1Hr1G030420.1	Barley	mitochondrion	29.46	60.32
PGSC0003DMT400068159	Potato	mitochondrion	32.56	60.0
Solyc12g055760.1.1	Tomato	plastid	32.56	60.0
TraesCS5B01G015000.1	Wheat	mitochondrion	31.78	59.42
CDY02587	Canola	endoplasmic reticulum, extracellular	31.78	56.16
VIT_19s0014g04520.t01	Wine grape	cytosol	19.38	51.02
HORVU5Hr1G004830.5	Barley	mitochondrion	32.56	48.84
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	24.81	42.67
CDX98292	Canola	cytosol	34.11	26.67

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0046933	GO:GO:0099132
EnsemblPlantsGene:GSMUA_Achr1G15900_001	EnsemblPlants:GSMUA_Achr1P15900_001	EnsemblPlants:GSMUA_Achr1T15900_001	InterPro:IPR036742	UniProt:M0S098	PFAM:PF04627
PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI000294F475	SEG:seg	:

Description

ATP synthase subunit epsilon, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G15900_001]

Coordinates

chr1:+:11921162..11924845

Molecular Weight (calculated)

14629.8 Da

IEP (calculated)

9.413

GRAVY (calculated)

-0.028

Length

129 amino acids

Sequence
(BLAST)

001: MASAAAAAVP FWRAAGMTYI TYSNICASLV RSCLKEPYKS ETSGREKVHF NVTKWANGKP EKPAEHSYAL LPWLIARLVN KASMLLQMQT NAYLAGMCDS
101: VVVYFVCSFT CTQMFDMHTV HYRKYHRMS

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.