CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32413	Canola	plastid	100.0	100.0
CDY27534	Canola	mitochondrion, plastid	88.57	88.57
CDY46549	Canola	mitochondrion	88.57	88.57
CDY37308	Canola	mitochondrion, plastid	91.43	87.67
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	87.14	87.14
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	87.14	87.14
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	85.71	85.71
PGSC0003DMT400074206	Potato	mitochondrion, plastid	81.43	81.43
CDY02587	Canola	endoplasmic reticulum, extracellular	82.86	79.45
Solyc12g055760.1.1	Tomato	plastid	78.57	78.57
Solyc06g063220.2.1	Tomato	plastid	78.57	78.57
TraesCS3A01G291800.1	Wheat	mitochondrion	70.0	77.78
TraesCS3B01G326400.1	Wheat	plastid	68.57	76.19
PGSC0003DMT400023749	Potato	mitochondrion, plastid	75.71	75.71
EES01052	Sorghum	mitochondrion	74.29	75.36
PGSC0003DMT400068159	Potato	mitochondrion	74.29	74.29
VIT_10s0092g00280.t01	Wine grape	mitochondrion	57.14	74.07
Zm00001d044441_P002	Maize	mitochondrion	72.86	72.86
TraesCS3D01G291500.1	Wheat	mitochondrion	71.43	72.46
GSMUA_Achr2P05010_001	Banana	cytosol	57.14	71.43
Zm00001d011314_P001	Maize	mitochondrion	72.86	69.86
Os08t0250200-01	Rice	mitochondrion	68.57	69.57
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	71.43	69.44
GSMUA_Achr9P19600_001	Banana	mitochondrion	65.71	64.79
VIT_19s0014g04520.t01	Wine grape	cytosol	42.86	61.22
TraesCS5A01G017000.1	Wheat	mitochondrion	58.57	59.42
TraesCS5B01G015000.1	Wheat	mitochondrion	57.14	57.97
HORVU1Hr1G030420.1	Barley	mitochondrion	50.0	55.56
HORVU5Hr1G004830.5	Barley	mitochondrion	55.71	45.35
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	48.57	45.33
GSMUA_Achr1P15900_001	Banana	plastid	65.71	35.66
CDX98292	Canola	cytosol	75.71	32.12

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	GO:A0A078H6H6	UniProt:A0A078H6H6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt
EnsemblPlants:CDX82211	ProteinID:CDX82211	ProteinID:CDX82211.1	ProteinID:CDY32413.1	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0046933	GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00137302001	InterPro:IPR036742	PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690
UniParc:UPI0004EDBC00	:	:	:	:	:

Description

BnaA03g36100DBnaA03g36100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6H6]

Coordinates

chrLK031828:-:20194..21090

Molecular Weight (calculated)

7832.5 Da

IEP (calculated)

10.120

GRAVY (calculated)

-0.286

Length

70 amino acids

Sequence
(BLAST)

1: MASTAAVPFW RAAGMTYITY SNICANLVRN CLKEPFKAES MSREKVHFSL SKWADGKPQK PVLRSDAPQV

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.