Factsheet for GSMUA_Achr2P05010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030431.1-P	Field mustard	cytosol	69.64	69.64
GSMUA_Achr9P19600_001	Banana	mitochondrion	85.71	67.61
Solyc06g063220.2.1	Tomato	plastid	80.36	64.29
Bra014294.1-P	Field mustard	mitochondrion	75.0	60.0
PGSC0003DMT400023749	Potato	mitochondrion, plastid	75.0	60.0
CDY46549	Canola	mitochondrion	75.0	60.0
KRH44639	Soybean	mitochondrion	69.64	59.09
Solyc12g055760.1.1	Tomato	plastid	73.21	58.57
PGSC0003DMT400074206	Potato	mitochondrion, plastid	73.21	58.57
CDY32413	Canola	plastid	71.43	57.14
PGSC0003DMT400068159	Potato	mitochondrion	71.43	57.14
CDX82211	Canola	plastid	71.43	57.14
KRH47013	Soybean	mitochondrion	71.43	57.14
Zm00001d044441_P002	Maize	mitochondrion	69.64	55.71
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.64	55.71
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.64	55.71
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.64	55.71
CDY27534	Canola	mitochondrion, plastid	69.64	55.71
VIT_19s0014g04520.t01	Wine grape	cytosol	48.21	55.1
EES01052	Sorghum	mitochondrion	67.86	55.07
TraesCS3A01G291800.1	Wheat	mitochondrion	60.71	53.97
Os08t0250200-01	Rice	mitochondrion	66.07	53.62
CDY37308	Canola	mitochondrion, plastid	69.64	53.42
TraesCS3B01G326400.1	Wheat	plastid	58.93	52.38
Zm00001d011314_P001	Maize	mitochondrion	67.86	52.05
VIT_10s0092g00280.t01	Wine grape	mitochondrion	48.21	50.0
Bra023896.1-P	Field mustard	mitochondrion	64.29	50.0
TraesCS3D01G291500.1	Wheat	mitochondrion	60.71	49.28
TraesCS5B01G015000.1	Wheat	mitochondrion	60.71	49.28
CDY02587	Canola	endoplasmic reticulum, extracellular	62.5	47.95
TraesCS5A01G017000.1	Wheat	mitochondrion	58.93	47.83
HORVU1Hr1G030420.1	Barley	mitochondrion	51.79	46.03
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	58.93	45.83
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	53.57	40.0
HORVU5Hr1G004830.5	Barley	mitochondrion	58.93	38.37
GSMUA_Achr1P15900_001	Banana	plastid	71.43	31.01
CDX98292	Canola	cytosol	60.71	20.61

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0046933	GO:GO:0099132
EnsemblPlantsGene:GSMUA_Achr2G05010_001	EnsemblPlants:GSMUA_Achr2P05010_001	EnsemblPlants:GSMUA_Achr2T05010_001	InterPro:IPR036742	UniProt:M0S592	PFAM:PF04627
PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI000294FAF5	:	:

Description

ATP synthase subunit epsilon, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr2G05010_001]

Coordinates

chr2:-:10225364..10228602

Molecular Weight (calculated)

6332.5 Da

IEP (calculated)

8.734

GRAVY (calculated)

-0.521

Length

56 amino acids

Sequence
(BLAST)

1: MTYITYSNIC ASLVRGCLKE PYRSEAVSRE KVHFIVSKWA DGKPEKPSIR SDSPEA

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.