Factsheet for VIT_09s0018g01930.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00280.t01	Wine grape	mitochondrion	62.5	83.33
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.61	75.71
Bra014294.1-P	Field mustard	mitochondrion	72.22	74.29
CDY46549	Canola	mitochondrion	72.22	74.29
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.83	72.86
Bra030431.1-P	Field mustard	cytosol	55.56	71.43
CDX82211	Canola	plastid	69.44	71.43
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.44	71.43
CDY32413	Canola	plastid	69.44	71.43
EES01052	Sorghum	mitochondrion	66.67	69.57
Zm00001d044441_P002	Maize	mitochondrion	66.67	68.57
Solyc06g063220.2.1	Tomato	plastid	66.67	68.57
PGSC0003DMT400074206	Potato	mitochondrion, plastid	66.67	68.57
PGSC0003DMT400023749	Potato	mitochondrion, plastid	66.67	68.57
VIT_19s0014g04520.t01	Wine grape	cytosol	45.83	67.35
CDY27534	Canola	mitochondrion, plastid	65.28	67.14
CDY37308	Canola	mitochondrion, plastid	68.06	67.12
KRH44639	Soybean	mitochondrion	61.11	66.67
PGSC0003DMT400068159	Potato	mitochondrion	63.89	65.71
Solyc12g055760.1.1	Tomato	plastid	63.89	65.71
Bra023896.1-P	Field mustard	mitochondrion	65.28	65.28
TraesCS3B01G326400.1	Wheat	plastid	56.94	65.08
TraesCS3A01G291800.1	Wheat	mitochondrion	56.94	65.08
Zm00001d011314_P001	Maize	mitochondrion	65.28	64.38
Os08t0250200-01	Rice	mitochondrion	61.11	63.77
KRH47013	Soybean	mitochondrion	59.72	61.43
GSMUA_Achr9P19600_001	Banana	mitochondrion	59.72	60.56
CDY02587	Canola	endoplasmic reticulum, extracellular	61.11	60.27
TraesCS3D01G291500.1	Wheat	mitochondrion	56.94	59.42
GSMUA_Achr2P05010_001	Banana	cytosol	45.83	58.93
TraesCS5A01G017000.1	Wheat	mitochondrion	54.17	56.52
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	58.33	56.0
HORVU1Hr1G030420.1	Barley	mitochondrion	48.61	55.56
TraesCS5B01G015000.1	Wheat	mitochondrion	52.78	55.07
HORVU5Hr1G004830.5	Barley	mitochondrion	52.78	44.19
GSMUA_Achr1P15900_001	Banana	plastid	61.11	34.11
CDX98292	Canola	cytosol	59.72	26.06

Protein Annotations

Gene3D:1.10.1620.20	EntrezGene:100248446	wikigene:100248446	EntrezGene:100854097	wikigene:100854097	MapMan:2.4.6.2.6
EMBL:AM443881	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	ProteinID:CAN67426	ProteinID:CAN67426.1	ProteinID:CCB49733
ProteinID:CCB49733.1	UniProt:F6HBU5	EMBL:FN595513	GO:GO:0000275	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0046933
GO:GO:0099132	InterPro:IPR036742	EntrezGene:LOC100248446	wikigene:LOC100248446	EntrezGene:LOC100854097	wikigene:LOC100854097
PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	UniParc:UPI0002109AF5	ArrayExpress:VIT_09s0018g01930
EnsemblPlantsGene:VIT_09s0018g01930	EnsemblPlants:VIT_09s0018g01930.t01	RefSeq:XP_002274249	RefSeq:XP_002274249.1	RefSeq:XP_003634691	RefSeq:XP_003634691.1

Description

No Description!

Coordinates

chr9:-:19525559..19533404

Molecular Weight (calculated)

7988.7 Da

IEP (calculated)

10.628

GRAVY (calculated)

-0.282

Length

72 amino acids

Sequence
(BLAST)

1: MASAVGSGAA VPFWRAAGMT YISYSNICAN MVRNCLKEPF KSEALTREKV HFSISKWDNG VPQKPRLRQK VG

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.