Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82211 | Canola | plastid | 79.45 | 82.86 |
| CDY32413 | Canola | plastid | 79.45 | 82.86 |
| CDY46549 | Canola | mitochondrion | 71.23 | 74.29 |
| CDY43919 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 71.23 | 74.29 |
| CDY27534 | Canola | mitochondrion, plastid | 71.23 | 74.29 |
| CDY37308 | Canola | mitochondrion, plastid | 73.97 | 73.97 |
| TraesCS3A01G291800.1 | Wheat | mitochondrion | 63.01 | 73.02 |
| CDX87828 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 69.86 | 72.86 |
| AT1G51650.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 68.49 | 71.43 |
| TraesCS3B01G326400.1 | Wheat | plastid | 61.64 | 71.43 |
| PGSC0003DMT400074206 | Potato | mitochondrion, plastid | 67.12 | 70.0 |
| EES01052 | Sorghum | mitochondrion | 65.75 | 69.57 |
| Solyc06g063220.2.1 | Tomato | plastid | 65.75 | 68.57 |
| VIT_10s0092g00280.t01 | Wine grape | mitochondrion | 50.68 | 68.52 |
| TraesCS3D01G291500.1 | Wheat | mitochondrion | 64.38 | 68.12 |
| Zm00001d044441_P002 | Maize | mitochondrion | 64.38 | 67.14 |
| Solyc12g055760.1.1 | Tomato | plastid | 64.38 | 67.14 |
| PGSC0003DMT400023749 | Potato | mitochondrion, plastid | 64.38 | 67.14 |
| PGSC0003DMT400068159 | Potato | mitochondrion | 63.01 | 65.71 |
| Zm00001d011314_P001 | Maize | mitochondrion | 64.38 | 64.38 |
| Os08t0250200-01 | Rice | mitochondrion | 60.27 | 63.77 |
| GSMUA_Achr2P05010_001 | Banana | cytosol | 47.95 | 62.5 |
| VIT_09s0018g01930.t01 | Wine grape | mitochondrion, plastid | 60.27 | 61.11 |
| GSMUA_Achr9P19600_001 | Banana | mitochondrion | 53.42 | 54.93 |
| HORVU1Hr1G030420.1 | Barley | mitochondrion | 46.58 | 53.97 |
| TraesCS5A01G017000.1 | Wheat | mitochondrion | 50.68 | 53.62 |
| VIT_19s0014g04520.t01 | Wine grape | cytosol | 35.62 | 53.06 |
| TraesCS5B01G015000.1 | Wheat | mitochondrion | 49.32 | 52.17 |
| VIT_18s0089g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 46.58 | 45.33 |
| HORVU5Hr1G004830.5 | Barley | mitochondrion | 49.32 | 41.86 |
| GSMUA_Achr1P15900_001 | Banana | plastid | 56.16 | 31.78 |
| CDX98292 | Canola | cytosol | 71.23 | 31.52 |
Protein Annotations
| Gene3D:1.10.1620.20 | MapMan:2.4.6.2.6 | GO:A0A078ENA1 | InterPro:ATP_synth_F1_esu_mt | InterPro:ATP_synth_F1_esu_sf_mt | EnsemblPlants:CDY02587 |
| ProteinID:CDY02587 | ProteinID:CDY02587.1 | GO:GO:0000275 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046933 | EnsemblPlantsGene:GSBRNA2T00114688001 | InterPro:IPR036742 | PFAM:PF04627 |
| PANTHER:PTHR12448 | PANTHER:PTHR12448:SF0 | SUPFAM:SSF48690 | SignalP:SignalP-noTM | UniParc:UPI0004EE5A00 | : |
Description
BnaC02g08480D
Coordinates
chrLK031936:-:125017..125238
Molecular Weight (calculated)
8206.0 Da
IEP (calculated)
8.926
GRAVY (calculated)
-0.062
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MASTAAVLFW RAVGMTCITY SNICANLVRN CLKEPFKTES MSSEKVHFSL SKWADGKPQK PGIFFFTPFP QDP
1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV
Arabidopsis Description
ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.