Factsheet for TraesCS5A01G017000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G015000.1	Wheat	mitochondrion	94.2	94.2
HORVU1Hr1G030420.1	Barley	mitochondrion	72.46	79.37
EES01052	Sorghum	mitochondrion	72.46	72.46
TraesCS3A01G291800.1	Wheat	mitochondrion	65.22	71.43
Os08t0250200-01	Rice	mitochondrion	71.01	71.01
Zm00001d044441_P002	Maize	mitochondrion	71.01	70.0
Zm00001d011314_P001	Maize	mitochondrion	71.01	67.12
PGSC0003DMT400023749	Potato	mitochondrion, plastid	63.77	62.86
PGSC0003DMT400074206	Potato	mitochondrion, plastid	62.32	61.43
Solyc06g063220.2.1	Tomato	plastid	62.32	61.43
Solyc12g055760.1.1	Tomato	plastid	62.32	61.43
VIT_10s0092g00280.t01	Wine grape	mitochondrion	47.83	61.11
GSMUA_Achr9P19600_001	Banana	mitochondrion	62.32	60.56
PGSC0003DMT400068159	Potato	mitochondrion	60.87	60.0
GSMUA_Achr2P05010_001	Banana	cytosol	47.83	58.93
Bra014294.1-P	Field mustard	mitochondrion	59.42	58.57
CDX82211	Canola	plastid	59.42	58.57
CDY46549	Canola	mitochondrion	59.42	58.57
CDY32413	Canola	plastid	59.42	58.57
AT1G51650.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.42	58.57
HORVU5Hr1G004830.5	Barley	mitochondrion	72.46	58.14
KRH44639	Soybean	mitochondrion	55.07	57.58
CDX87828	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.97	57.14
CDY43919	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.97	57.14
KRH47013	Soybean	mitochondrion	55.07	54.29
CDY27534	Canola	mitochondrion, plastid	55.07	54.29
Bra023896.1-P	Field mustard	mitochondrion	56.52	54.17
VIT_09s0018g01930.t01	Wine grape	mitochondrion, plastid	56.52	54.17
CDY37308	Canola	mitochondrion, plastid	56.52	53.42
CDY02587	Canola	endoplasmic reticulum, extracellular	53.62	50.68
Bra030431.1-P	Field mustard	cytosol	40.58	50.0
VIT_19s0014g04520.t01	Wine grape	cytosol	31.88	44.9
VIT_18s0089g00420.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	37.68	34.67
GSMUA_Achr1P15900_001	Banana	plastid	60.87	32.56
CDX98292	Canola	cytosol	55.07	23.03

Protein Annotations

Gene3D:1.10.1620.20	MapMan:2.4.6.2.6	InterPro:ATP_synth_F1_esu_mt	InterPro:ATP_synth_F1_esu_sf_mt	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0046933	InterPro:IPR036742
PFAM:PF04627	PANTHER:PTHR12448	PANTHER:PTHR12448:SF0	SUPFAM:SSF48690	EnsemblPlantsGene:TraesCS5A01G017000	EnsemblPlants:TraesCS5A01G017000.1
TIGR:cd12153	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:12818891..12821550

Molecular Weight (calculated)

7710.1 Da

IEP (calculated)

8.850

GRAVY (calculated)

-0.535

Length

69 amino acids

Sequence
(BLAST)

1: MSATTAAVPF WRAAGMTYVG YSRLCASMVR SCLKEPYKSE AAEVEKVHYS RSKWSDGKQA KPTICEDDK

Best Arabidopsis Sequence Match ( AT1G51650.1 )
(BLAST)

1: MASNAAVPFW RAAGMTYISY SNICANIVRN CLKEPHKAEA LTREKVHFSL SKWADGKPQK PVLRSDTPEV

Arabidopsis Description

ATP synthase subunit epsilon, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96253]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.