Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005560.1-P | Field mustard | plastid | 96.8 | 93.06 |
| CDY12178 | Canola | cytosol | 94.94 | 92.74 |
| CDX79472 | Canola | cytosol, plastid | 92.57 | 89.79 |
| CDY19162 | Canola | extracellular | 92.98 | 89.74 |
| CDX84724 | Canola | cytosol, plastid | 92.98 | 89.65 |
| AT2G32730.1 | Thale cress | cytosol | 92.78 | 89.54 |
| CDY23791 | Canola | cytosol, plastid | 92.88 | 89.29 |
| KRH41754 | Soybean | nucleus | 82.15 | 79.13 |
| KRH60454 | Soybean | endoplasmic reticulum | 81.84 | 78.83 |
| PGSC0003DMT400040763 | Potato | cytosol | 78.12 | 76.23 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 77.81 | 75.93 |
| Solyc09g091750.2.1 | Tomato | plastid | 78.43 | 75.7 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 78.43 | 75.7 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 78.22 | 74.98 |
| Os04t0608500-01 | Rice | plasma membrane | 23.63 | 74.35 |
| KXG27072 | Sorghum | plasma membrane | 75.34 | 72.42 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.73 | 71.89 |
| Zm00001d026265_P002 | Maize | plasma membrane | 75.23 | 71.33 |
| Os08t0224700-01 | Rice | plasma membrane | 71.62 | 70.31 |
| Zm00001d049357_P001 | Maize | plasma membrane | 71.31 | 69.94 |
| EES13543 | Sorghum | endoplasmic reticulum | 71.21 | 69.84 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 72.24 | 69.44 |
| Zm00001d024342_P001 | Maize | plasma membrane | 71.0 | 69.42 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 67.7 | 68.62 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 72.96 | 68.57 |
| TraesCS2A01G430100.2 | Wheat | golgi | 73.58 | 68.56 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 72.86 | 68.54 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 66.36 | 68.33 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 69.45 | 67.17 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 69.14 | 66.87 |
| CDY33145 | Canola | extracellular | 0.41 | 17.39 |
| CDY05774 | Canola | cytosol | 15.07 | 16.29 |
| CDY38389 | Canola | cytosol, extracellular | 14.86 | 16.14 |
| CDX92875 | Canola | extracellular | 14.76 | 16.05 |
| CDY29907 | Canola | extracellular | 14.76 | 16.05 |
| CDY35187 | Canola | cytosol, extracellular | 14.76 | 16.03 |
| CDY31952 | Canola | plasma membrane | 14.04 | 15.89 |
| CDY14239 | Canola | cytosol, extracellular | 14.45 | 15.77 |
| CDX97442 | Canola | cytosol | 13.52 | 14.84 |
| CDY65736 | Canola | extracellular | 3.72 | 8.87 |
| CDY33144 | Canola | extracellular | 2.79 | 8.63 |
| CDX99107 | Canola | cytosol | 2.17 | 8.11 |
| CDY72396 | Canola | cytosol | 0.31 | 2.08 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | GO:A0A078J713 | UniProt:A0A078J713 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlants:CDY60623 | ProteinID:CDY60623 | ProteinID:CDY60623.1 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0042176 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00029866001 | InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 |
| PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI0004EE1CE5 | SEG:seg | : | : | : | : |
Description
BnaAnng17060DBnaAnng17060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J713]
Coordinates
chrLK033899:-:31065..35885
Molecular Weight (calculated)
105393.0 Da
IEP (calculated)
5.222
GRAVY (calculated)
-0.029
Length
969 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFNCFYKQI MLIFLSLKLL HCLIRQLAAL LVSKVFYYLG ELNDSLSYAL GAGAFFDVSE DTDYVHTLLA KAIDEYAILR SKAVESSEMV DIDPRLEAIV
101: ERMLGKCITD GKYQQAMGIA LECRRLDKLE EAITKSDNVE GTLTYCINVS HSFVNRREYR HEVLSLLVEV YQKLPSPDYL SICQCLMFLD EPQGVATILE
201: KLLRSDSKDD ALLALQIAFD LVENEHQAFL LSVRDRLPAP KTRPVEVAQA VETTATTNEN LSRDVQMADD TPVTPDQTIV HETDPVDATY AERLTKIKGI
301: LSGETSIQLT LQFLYSHNKS DLLILKTIKQ SVEMRNSVCH SATIYANAIM HAGTTVDTFL RENLDWLSRA TNWAKFSATA GLGVIHRGHL QQGRSLMAPY
401: LPQGGAGGGG SPYSEGGALY ALGLIHANHG EGIKQFLRDS LRSTNVEVIQ HGACLGLGLS ALGTADEEIY DDVKSVLYTD SAVAGEAAGI SMGLLLVGTA
501: TEKASEMLAY AHETQHEKII RGLALGIALT VYGREEGADT LIEQMTRDQD PIIRYGGMYA LALAYCGTAN NKAIRQLLHF AVSDVSDDVR RTAVLALGFV
601: LYSDPEQTPR IVSLLSESYN PHVRYGAALA VGISCAGTGL SEAISLLEPL TSDVVDFVRQ GALIAMAMVM VQISEASDSR VGTFRRQLEK IILDKHEDTM
701: SKMGAILASG ILDAGGRNVT IRLLSKTKHD KVTAVIGLAV FSQFWYWYPL IYFISLAFSP TAFIGLNYDL KVPKFEFMSH AKPSLFEYPK PTTVPTSNTA
801: AKLPTAVLST SVKAKARAKK EAEQKANAEK ASGAEKSVSE SGSGKGKESA DKEGDSMQVD STATVEKKAA EPEAAFEILV NPARVVPAQE KYIKLLEDSR
901: YVPVKLAPSG FVLLKDLREH EPEVLSLTDA PTSAASPATG AAAATQGTTA SAMAVDDEPQ PPQAFEYAS
101: ERMLGKCITD GKYQQAMGIA LECRRLDKLE EAITKSDNVE GTLTYCINVS HSFVNRREYR HEVLSLLVEV YQKLPSPDYL SICQCLMFLD EPQGVATILE
201: KLLRSDSKDD ALLALQIAFD LVENEHQAFL LSVRDRLPAP KTRPVEVAQA VETTATTNEN LSRDVQMADD TPVTPDQTIV HETDPVDATY AERLTKIKGI
301: LSGETSIQLT LQFLYSHNKS DLLILKTIKQ SVEMRNSVCH SATIYANAIM HAGTTVDTFL RENLDWLSRA TNWAKFSATA GLGVIHRGHL QQGRSLMAPY
401: LPQGGAGGGG SPYSEGGALY ALGLIHANHG EGIKQFLRDS LRSTNVEVIQ HGACLGLGLS ALGTADEEIY DDVKSVLYTD SAVAGEAAGI SMGLLLVGTA
501: TEKASEMLAY AHETQHEKII RGLALGIALT VYGREEGADT LIEQMTRDQD PIIRYGGMYA LALAYCGTAN NKAIRQLLHF AVSDVSDDVR RTAVLALGFV
601: LYSDPEQTPR IVSLLSESYN PHVRYGAALA VGISCAGTGL SEAISLLEPL TSDVVDFVRQ GALIAMAMVM VQISEASDSR VGTFRRQLEK IILDKHEDTM
701: SKMGAILASG ILDAGGRNVT IRLLSKTKHD KVTAVIGLAV FSQFWYWYPL IYFISLAFSP TAFIGLNYDL KVPKFEFMSH AKPSLFEYPK PTTVPTSNTA
801: AKLPTAVLST SVKAKARAKK EAEQKANAEK ASGAEKSVSE SGSGKGKESA DKEGDSMQVD STATVEKKAA EPEAAFEILV NPARVVPAQE KYIKLLEDSR
901: YVPVKLAPSG FVLLKDLREH EPEVLSLTDA PTSAASPATG AAAATQGTTA SAMAVDDEPQ PPQAFEYAS
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.