Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 99.09 | 99.09 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 90.94 | 89.94 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 84.89 | 83.88 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 53.78 | 83.44 |
| KRH41754 | Soybean | nucleus | 82.98 | 81.91 |
| KRH60454 | Soybean | endoplasmic reticulum | 82.48 | 81.41 |
| AT2G32730.1 | Thale cress | cytosol | 81.97 | 81.08 |
| CDX79472 | Canola | cytosol, plastid | 80.87 | 80.38 |
| CDY19162 | Canola | extracellular | 81.07 | 80.18 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 80.97 | 80.08 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 80.87 | 79.98 |
| CDX84724 | Canola | cytosol, plastid | 80.77 | 79.8 |
| CDY23791 | Canola | cytosol, plastid | 80.87 | 79.66 |
| CDY12178 | Canola | cytosol | 79.56 | 79.64 |
| Bra005560.1-P | Field mustard | plastid | 80.36 | 79.17 |
| AT1G04810.1 | Thale cress | cytosol | 79.76 | 79.12 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 76.23 | 78.12 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.84 | 75.47 |
| KXG27072 | Sorghum | plasma membrane | 75.63 | 74.5 |
| Os04t0608500-01 | Rice | plasma membrane | 23.06 | 74.35 |
| Zm00001d026265_P002 | Maize | plasma membrane | 75.13 | 72.99 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.6 | 72.97 |
| EES13543 | Sorghum | endoplasmic reticulum | 72.41 | 72.77 |
| Os08t0224700-01 | Rice | plasma membrane | 72.21 | 72.64 |
| Zm00001d049357_P001 | Maize | plasma membrane | 72.21 | 72.57 |
| Zm00001d024342_P001 | Maize | plasma membrane | 72.31 | 72.45 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 73.21 | 72.12 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.67 | 71.41 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 68.48 | 71.13 |
| TraesCS2A01G430100.2 | Wheat | golgi | 73.82 | 70.48 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 73.11 | 70.42 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 73.01 | 70.39 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 21.25 | 70.33 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 70.29 | 69.66 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 70.09 | 69.46 |
| PGSC0003DMT400024306 | Potato | cytosol | 15.21 | 16.85 |
| PGSC0003DMT400056260 | Potato | cytosol | 1.11 | 6.11 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:102585142 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 |
| UniProt:M1BAD2 | PFAM:PF01851 | PFAM:PF13646 | EnsemblPlantsGene:PGSC0003DMG400015761 | PGSC:PGSC0003DMG400015761 | EnsemblPlants:PGSC0003DMT400040763 |
| PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI0002959947 | RefSeq:XP_006365478.1 | SEG:seg | : | : | : |
Description
26S proteasome subunit RPN2a [Source:PGSC_GENE;Acc:PGSC0003DMG400015761]
Coordinates
chr5:+:49089603..49097664
Molecular Weight (calculated)
107877.0 Da
IEP (calculated)
5.022
GRAVY (calculated)
-0.132
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTVSSAGG LLAMLNESHP QLKLHALSNL NAFVDYFWPE ISTSVALIES LYEDEEFAQR QLAALVASKV FYHLGEHNDS LSYALGAGPL FDVNEESDYV
101: HTVLAKALDE YASHKTKAAE SNDEAVKVDP RLEAIVERML EKCIVDRKYQ QAIGMAIECR RLDKVAEAIV RSDNVDATLA YCSNVSHNFV SRRVYRSEVL
201: RLLVEVYEGT PSPNYLSMCQ WLMFLDKPEN VASILEKLLR SENKDDALLA FQIAFDLVEN EHQAFLLNVR DRLSSPEVQP SEPAEPDTAQ TGDATAAEDV
301: QMAEENQPLI ETRVDPKEAI YAERLGKIKG ILSGETSIKL TLQFLYSHNK SDLLILKTIK QSVEMRNSVC HSATIYANAI MHAGTTVDTF LRENLDWLSR
401: ATNWAKFSAT AGLGVIHCGH LQQGRSLMAP YLPQGGAGGG GSPYSEGGAL YALGLIHANH GEGIKQFLRE SLRSTNVEVI QHGACLGLGL AALGTADEDI
501: YDDIKTVLYT DSAVAGEAAG IGMGLLMVGT ASEKAGEMLA YAHETQHEKI IRGLALGIAL TVYGREEEAD TLIEQMTRDQ DPILRYGGMY ALAMAYRGTA
601: NNKAIRQLLH FAVSDVSDDV RRTAVLALGF VMYSEPEQMP RIVSLLSESY NPHVRYGAAL AVGISCAGTG LSEAISLLEP LTSDVVDFVR QGALIAMAMV
701: MVQISEASDS RVGAFRRQLE KIILDKHEDT MSKMGAILAS GILDAGGRNV TIKLLSKSKH DKITAVVGLA VFSQFWYWYP LIYFVSLAFS PTALIGLNYD
801: LKVPKFDFVS QAKPSLFEYP KPTTVATTSS AVKLPTAVLS TSVRAKARAS KKEAEKANAE KASGASTSAA TTSDKGKSTS KDGESMQVDT PAEKKNEPEP
901: SFEILTNPAR VVPTQEKHIK FLEESRYLPI KSSSSGFVLL KDLRPDEPEV LALTDTPSST TSSTGGSAGQ QGSASAVAAD EEPQPPQAFE YTS
101: HTVLAKALDE YASHKTKAAE SNDEAVKVDP RLEAIVERML EKCIVDRKYQ QAIGMAIECR RLDKVAEAIV RSDNVDATLA YCSNVSHNFV SRRVYRSEVL
201: RLLVEVYEGT PSPNYLSMCQ WLMFLDKPEN VASILEKLLR SENKDDALLA FQIAFDLVEN EHQAFLLNVR DRLSSPEVQP SEPAEPDTAQ TGDATAAEDV
301: QMAEENQPLI ETRVDPKEAI YAERLGKIKG ILSGETSIKL TLQFLYSHNK SDLLILKTIK QSVEMRNSVC HSATIYANAI MHAGTTVDTF LRENLDWLSR
401: ATNWAKFSAT AGLGVIHCGH LQQGRSLMAP YLPQGGAGGG GSPYSEGGAL YALGLIHANH GEGIKQFLRE SLRSTNVEVI QHGACLGLGL AALGTADEDI
501: YDDIKTVLYT DSAVAGEAAG IGMGLLMVGT ASEKAGEMLA YAHETQHEKI IRGLALGIAL TVYGREEEAD TLIEQMTRDQ DPILRYGGMY ALAMAYRGTA
601: NNKAIRQLLH FAVSDVSDDV RRTAVLALGF VMYSEPEQMP RIVSLLSESY NPHVRYGAAL AVGISCAGTG LSEAISLLEP LTSDVVDFVR QGALIAMAMV
701: MVQISEASDS RVGAFRRQLE KIILDKHEDT MSKMGAILAS GILDAGGRNV TIKLLSKSKH DKITAVVGLA VFSQFWYWYP LIYFVSLAFS PTALIGLNYD
801: LKVPKFDFVS QAKPSLFEYP KPTTVATTSS AVKLPTAVLS TSVRAKARAS KKEAEKANAE KASGASTSAA TTSDKGKSTS KDGESMQVDT PAEKKNEPEP
901: SFEILTNPAR VVPTQEKHIK FLEESRYLPI KSSSSGFVLL KDLRPDEPEV LALTDTPSST TSSTGGSAGQ QGSASAVAAD EEPQPPQAFE YTS
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.