Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026265_P002 | Maize | plasma membrane | 97.42 | 96.09 |
| Os04t0608500-01 | Rice | plasma membrane | 28.17 | 92.21 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 90.48 | 90.48 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 89.09 | 87.1 |
| TraesCS2A01G430100.2 | Wheat | golgi | 89.68 | 86.92 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 88.59 | 86.7 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 77.88 | 82.11 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 76.39 | 81.83 |
| EES13543 | Sorghum | endoplasmic reticulum | 79.66 | 81.28 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 80.46 | 80.94 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 80.85 | 80.61 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 79.96 | 80.44 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 50.0 | 78.75 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 78.27 | 78.51 |
| AT2G32730.1 | Thale cress | cytosol | 76.98 | 77.29 |
| CDY12178 | Canola | cytosol | 75.99 | 77.22 |
| KRH60454 | Soybean | endoplasmic reticulum | 76.98 | 77.14 |
| KRH41754 | Soybean | nucleus | 76.88 | 77.04 |
| CDX79472 | Canola | cytosol, plastid | 76.19 | 76.88 |
| CDY19162 | Canola | extracellular | 76.39 | 76.69 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 76.29 | 76.59 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 76.19 | 76.49 |
| CDX84724 | Canola | cytosol, plastid | 76.19 | 76.42 |
| CDY23791 | Canola | cytosol, plastid | 76.29 | 76.29 |
| Bra005560.1-P | Field mustard | plastid | 76.29 | 76.29 |
| AT1G04810.1 | Thale cress | cytosol | 75.4 | 75.92 |
| PGSC0003DMT400040763 | Potato | cytosol | 74.5 | 75.63 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 75.3 | 75.6 |
| Solyc09g091750.2.1 | Tomato | plastid | 75.1 | 75.4 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 72.42 | 75.34 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 74.11 | 75.23 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.0 | 70.81 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 19.84 | 66.67 |
| EES04513 | Sorghum | cytosol | 14.78 | 16.67 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | UniProt:A0A1B6PN20 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 |
| EnsemblPlants:KXG27072 | ProteinID:KXG27072 | ProteinID:KXG27072.1 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 |
| PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | EnsemblPlantsGene:SORBI_3006G208500 | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI00081ADCFD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:55826690..55833700
Molecular Weight (calculated)
109525.0 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.141
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVATVSSA SGLLAMLQEP APELKLHALA SLNSVVHLFW PEISTSVPTI ESLYEDEEFE QRQLAALVVS KVFYYLGELN DSLSYALGAG PLFHVSDDSD
0101: YAHALLAKAL DEYASIKTRA SKATEEEENI DPRLEAIVER MLEKCILDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIQGA LLYCINLSHQ YVNHREYRFE
0201: VLRCLVKIYQ TLPNPDYLSI CQCLMFLGEP ETVASILDKL LSGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLASPTPE PSNPESEPTV QDDQTASTVG
0301: TGTEAAGDVQ MRDDTTTPNG NAHTVDPNEV AHADRLAKIK GILSGETSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICANA IMHAGTTVDT
0401: FLRENLEWLS RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG
0501: LAALGTADEE IYEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKASEML AYAHDTQHEK IIRGLSLGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM
0601: YALALAYRGT ANNKAIHQLL HFAVSDVSDD VRRTAVMALG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGS GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGAFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVVGL AVFSQFWYWY PLLYFISLAF
0801: SPTAFIGLNS DLKVPKFEFL SHAKPSLFEY PKPTTQQTTT STVKLPTAIL STYAKAKSRA KKDAESKANQ EKATEEASGS TSSKAAKAQE KDADAMQVDN
0901: ATEKKAPEPE ATYQLLTNPA RVIPAQEKFI KFLENSRYVP VKPAPSGFIL LRDLQPTEAE DLALTDAPTT VAGSTGNTAP AAGQQGSGSS AMAVDDEPQP
1001: PQPFEYTS
0101: YAHALLAKAL DEYASIKTRA SKATEEEENI DPRLEAIVER MLEKCILDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIQGA LLYCINLSHQ YVNHREYRFE
0201: VLRCLVKIYQ TLPNPDYLSI CQCLMFLGEP ETVASILDKL LSGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLASPTPE PSNPESEPTV QDDQTASTVG
0301: TGTEAAGDVQ MRDDTTTPNG NAHTVDPNEV AHADRLAKIK GILSGETSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICANA IMHAGTTVDT
0401: FLRENLEWLS RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG
0501: LAALGTADEE IYEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKASEML AYAHDTQHEK IIRGLSLGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM
0601: YALALAYRGT ANNKAIHQLL HFAVSDVSDD VRRTAVMALG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGS GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGAFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVVGL AVFSQFWYWY PLLYFISLAF
0801: SPTAFIGLNS DLKVPKFEFL SHAKPSLFEY PKPTTQQTTT STVKLPTAIL STYAKAKSRA KKDAESKANQ EKATEEASGS TSSKAAKAQE KDADAMQVDN
0901: ATEKKAPEPE ATYQLLTNPA RVIPAQEKFI KFLENSRYVP VKPAPSGFIL LRDLQPTEAE DLALTDAPTT VAGSTGNTAP AAGQQGSGSS AMAVDDEPQP
1001: PQPFEYTS
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.