Factsheet for HORVU1Hr1G081810.8

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G348400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	86.92	88.31
TraesCS1B01G363000.1	Wheat	cytosol	90.38	86.23
TraesCS1D01G351400.1	Wheat	cytosol, endoplasmic reticulum	89.96	85.83
KXG27072	Sorghum	plasma membrane	82.11	77.88
Os04t0608500-01	Rice	plasma membrane	24.69	76.62
Zm00001d026265_P002	Maize	plasma membrane	81.49	76.22
Zm00001d002373_P006	Maize	cytosol, plasma membrane	79.71	75.6
VIT_00s0215g00040.t01	Wine grape	extracellular	48.43	72.34
GSMUA_Achr1P10550_001	Banana	cytosol	75.52	71.41
VIT_10s0042g00800.t01	Wine grape	cytosol, plastid	74.58	70.95
VIT_00s0125g00350.t01	Wine grape	cytosol	13.49	69.73
AT2G32730.1	Thale cress	cytosol	73.12	69.62
CDX79472	Canola	cytosol, plastid	72.7	69.57
CDY12178	Canola	cytosol	72.07	69.46
CDX84724	Canola	cytosol, plastid	72.91	69.35
Bra022899.1-P	Field mustard	cytosol, plastid	72.8	69.32
KRH60454	Soybean	endoplasmic reticulum	72.8	69.18
PGSC0003DMT400076219	Potato	endoplasmic reticulum	72.49	69.02
CDY19162	Canola	extracellular	72.49	69.02
KRH41754	Soybean	nucleus	72.59	68.99
Bra021810.1-P	Field mustard	cytosol, plastid	72.38	68.92
Solyc09g091750.2.1	Tomato	plastid	72.18	68.73
CDY23791	Canola	cytosol, plastid	72.38	68.65
Bra005560.1-P	Field mustard	plastid	72.28	68.55
PGSC0003DMT400040763	Potato	cytosol	71.13	68.48
AT1G04810.1	Thale cress	cytosol	71.55	68.33
Solyc05g053650.2.1	Tomato	endoplasmic reticulum	70.82	68.18
CDY60623	Canola	endoplasmic reticulum, golgi	68.62	67.7
VIT_00s0215g00050.t01	Wine grape	cytosol	17.57	56.0
HORVU6Hr1G021020.1	Barley	cytosol	14.75	15.7
HORVU7Hr1G097500.16	Barley	endoplasmic reticulum, golgi, plasma membrane	9.52	15.53

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.6.2.2.2	InterPro:26S_Psome_Rpn2	UniProt:A0A287GHA7	InterPro:ARM-like	InterPro:ARM-type_fold
ncoils:Coil	GO:GO:0000502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056	GO:GO:0016020
GO:GO:0016021	GO:GO:0019538	GO:GO:0030234	GO:GO:0042176	GO:GO:0050790	EnsemblPlantsGene:HORVU1Hr1G081810
EnsemblPlants:HORVU1Hr1G081810.8	InterPro:IPR011989	PFAM:PF01851	PFAM:PF13646	PIRSF:PIRSF015947	PANTHER:PTHR10943
PANTHER:PTHR10943:SF10	InterPro:Proteasome/cyclosome_rpt	SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI000B469B89	SEG:seg

Description

26S proteasome non-ATPase regulatory subunit 1 homolog [Source:UniProtKB/TrEMBL;Acc:A0A287GHA7]

Coordinates

chrchr1H:-:528147299..528152111

Molecular Weight (calculated)

104562.0 Da

IEP (calculated)

4.947

GRAVY (calculated)

0.029

Length

956 amino acids

Sequence
(BLAST)

001: AATATATVSS AGGILAMLHE PAEELKLHAL ASLNSVVHLF YPEISTSIPA IESLYEDDEF DQRQLAALVV SKVFYYLGEL NDALSYALGA GPLFDVSEDS
101: DYARALLAEA LDEYVSFKAR ASKAMEEEEN VDPRLETIVE RMLERCILDG KYQQAMGMAL ECRRLDKLEE VIVRCDNIHG ALSYCINLSH QYVSHREYRC
201: EVLRYLVKIY QTLAHPDYLS ICQCLMFLGE PETVANILDT LLSGSKVCLF FTLSTTLLTL WSLLLTSDIV FIMQDDALLA YQIAFDLVEN ENQAFLLNVK
301: NRLDSQTVDP NEAVHADRLA KLKWILSGDK SIQLTLHFLH SHNRSDLLIL KTIKQAVETS SNVCHSATIC SNAIMHAGTT VDTFLRENLE WLSRATNWAK
401: FSATAGLGVI HRGHLQQGRA LMAPYLPQNG AVGGGSPYSE GGALYALGLI HANHGEGIKQ FLRESLRNTS AEVIQHGACL GLGLASLGTA DEEVFEDIKN
501: VLYTDSAVAG EAAGIGMGLV MVGTASEKAG EMLAYAHDTQ HEKIIRGLAL GIALTMYGRE EEADTLIEQM IRDQDPILRY GGMYALALAY RGTANNKAIH
601: QLLHFAVSDV SDDVRRTAVM GLGFVLYNEP EQTPRIVSLL SQSYNPHVRY GAALAVGISC AGTGLSDAIS LLEPLTSDVV DFVRQGALIA MAMVMIQTNE
701: SFDSRVGTFR RQLEKIILDK HEDTMSKMGA ILACGILDAG GRNVTIKLLS RNKHDKLTAV IGLAVFTQFW YWYPLLYFIS LAFSPTAIIG LNANLEVPKF
801: EFLSHAKPSL FEYPEPKTEQ ATTSAVELPT AILSTYAKAK SRAKKDAESK AAANQEKTAP EAETDAMQVD SNAEKKAPEP EPAFQILANP ARVVPLQEKF
901: IKFIEGSRYV PVRPAPCGGF ILLRDTQPSE AEELVVLTDA PATGQPVSGA SAMAVD

Best Arabidopsis Sequence Match ( AT2G32730.1 )
(BLAST)

0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS

Arabidopsis Description

RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.