Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19162 | Canola | extracellular | 98.91 | 99.3 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 98.81 | 99.2 |
| CDX79472 | Canola | cytosol, plastid | 95.24 | 96.1 |
| CDX84724 | Canola | cytosol, plastid | 95.24 | 95.52 |
| AT2G32730.1 | Thale cress | cytosol | 94.44 | 94.82 |
| CDY12178 | Canola | cytosol | 93.25 | 94.76 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 89.29 | 92.88 |
| KRH41754 | Soybean | nucleus | 83.33 | 83.5 |
| KRH60454 | Soybean | endoplasmic reticulum | 82.84 | 83.0 |
| PGSC0003DMT400040763 | Potato | cytosol | 79.66 | 80.87 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 79.27 | 80.46 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 79.86 | 80.18 |
| Solyc09g091750.2.1 | Tomato | plastid | 79.76 | 80.08 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 78.77 | 78.54 |
| KXG27072 | Sorghum | plasma membrane | 76.29 | 76.29 |
| Zm00001d026265_P002 | Maize | plasma membrane | 76.09 | 75.05 |
| Os04t0608500-01 | Rice | plasma membrane | 22.82 | 74.68 |
| Os08t0224700-01 | Rice | plasma membrane | 73.12 | 74.67 |
| Zm00001d049357_P001 | Maize | plasma membrane | 73.02 | 74.49 |
| EES13543 | Sorghum | endoplasmic reticulum | 72.42 | 73.89 |
| Zm00001d024342_P001 | Maize | plasma membrane | 72.62 | 73.86 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 73.31 | 73.31 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.29 | 72.43 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 68.65 | 72.38 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.46 | 72.26 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 73.81 | 72.16 |
| TraesCS2A01G430100.2 | Wheat | golgi | 74.4 | 72.12 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 73.31 | 71.75 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 70.34 | 70.76 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 70.14 | 70.56 |
| CDY33145 | Canola | extracellular | 0.4 | 17.39 |
| CDY05774 | Canola | cytosol | 14.68 | 16.52 |
| CDY38389 | Canola | cytosol, extracellular | 14.38 | 16.26 |
| CDX92875 | Canola | extracellular | 14.29 | 16.16 |
| CDY29907 | Canola | extracellular | 14.29 | 16.16 |
| CDY35187 | Canola | cytosol, extracellular | 14.29 | 16.14 |
| CDY31952 | Canola | plasma membrane | 13.69 | 16.12 |
| CDY14239 | Canola | cytosol, extracellular | 14.09 | 15.99 |
| CDX97442 | Canola | cytosol | 13.1 | 14.95 |
| CDY65736 | Canola | extracellular | 3.87 | 9.61 |
| CDY33144 | Canola | extracellular | 2.98 | 9.58 |
| CDX99107 | Canola | cytosol | 2.38 | 9.27 |
| CDY72396 | Canola | cytosol | 0.69 | 4.86 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | GO:A0A078GEJ9 | UniProt:A0A078GEJ9 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlants:CDY23791 | ProteinID:CDY23791 | ProteinID:CDY23791.1 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0042176 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00024153001 | InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 |
| PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI0004EDBDAB | SEG:seg | : | : | : | : |
Description
BnaC04g43310DBnaC04g43310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEJ9]
Coordinates
chrLK032148:-:593543..598489
Molecular Weight (calculated)
109340.0 Da
IEP (calculated)
5.046
GRAVY (calculated)
-0.075
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVMVSSAG GLLAMLNEPQ PSLKHHALSH LNNLVDRFWP EISTSVPIIE SLYEDEEFDM HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPQFDVSEDT
0101: DYVHTLLAKA IDEYASLRSK AVESNDMVDI DPRLEAIVER MLQKCITDGK YQQAMGIAIE CRRLDKLEEA IVKSDNVQGT LAYCINVSHS FVNRREYRHE
0201: VLTLLVKVYQ QLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSESKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RIVETVQTVE ITDAPNENPS
0301: GDVQMADGAP APTPAPAPAP APTVVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT
0401: VDTFLRENLD WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL
0501: GLGLSALGTA DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY
0601: GGMYALALAY SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV
0701: DFVRQGALIA MAMVMVQISE ASDSRVGKFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS
0801: LAFSPTAFIG LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAAKLPT AVLSTSVKAK ARAKKDAEQK ANAEKASGAE KPVSESGSGK EKEGDSMQVD
0901: STATVEKKAA EPEAAFEILV NPARVVPAQE KYIKLLEDSR YVPVKLAPSG FVLLKDLREH EPEVLSLTDA PTSTDSPAAG AAAATQGTTA SMAVDDEPQP
1001: PQAFEYAT
0101: DYVHTLLAKA IDEYASLRSK AVESNDMVDI DPRLEAIVER MLQKCITDGK YQQAMGIAIE CRRLDKLEEA IVKSDNVQGT LAYCINVSHS FVNRREYRHE
0201: VLTLLVKVYQ QLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSESKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RIVETVQTVE ITDAPNENPS
0301: GDVQMADGAP APTPAPAPAP APTVVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT
0401: VDTFLRENLD WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL
0501: GLGLSALGTA DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY
0601: GGMYALALAY SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV
0701: DFVRQGALIA MAMVMVQISE ASDSRVGKFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS
0801: LAFSPTAFIG LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAAKLPT AVLSTSVKAK ARAKKDAEQK ANAEKASGAE KPVSESGSGK EKEGDSMQVD
0901: STATVEKKAA EPEAAFEILV NPARVVPAQE KYIKLLEDSR YVPVKLAPSG FVLLKDLREH EPEVLSLTDA PTSTDSPAAG AAAATQGTTA SMAVDDEPQP
1001: PQAFEYAT
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.