CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99107	Canola	cytosol	59.11	71.43
CDY72396	Canola	cytosol	28.75	62.5
CDY65736	Canola	extracellular	77.96	60.1
AT4G08140.1	Thale cress	cytosol	13.74	51.19
PGSC0003DMT400056260	Potato	cytosol	29.39	51.11
Solyc10g008170.2.1	Tomato	cytosol	29.07	45.05
CDX92875	Canola	extracellular	45.69	16.05
CDY29907	Canola	extracellular	45.69	16.05
CDY38389	Canola	cytosol, extracellular	45.37	15.92
CDY35187	Canola	cytosol, extracellular	45.05	15.81
CDY31952	Canola	plasma membrane	40.58	14.84
CDY05774	Canola	cytosol	41.21	14.4
CDX97442	Canola	cytosol	40.58	14.38
CDY14239	Canola	cytosol, extracellular	39.94	14.08
CDY33145	Canola	extracellular	0.96	13.04
GSMUA_Achr11P...	Banana	cytosol	35.78	12.61
Os02t0146700-02	Rice	plasma membrane	35.78	12.47
TraesCS6D01G105500.1	Wheat	golgi	35.46	12.4
TraesCS6A01G116500.1	Wheat	golgi, unclear	35.46	12.4
TraesCS6B01G144500.1	Wheat	cytosol	35.46	12.28
HORVU6Hr1G021020.1	Barley	cytosol	35.14	12.25
EES04513	Sorghum	cytosol	34.82	12.19
Zm00001d053881_P001	Maize	mitochondrion, plastid	34.5	12.11
Os06t0699900-01	Rice	plasma membrane	34.82	12.1
Zm00001d015259_P001	Maize	cytosol	34.19	12.02
Os09t0326800-01	Rice	plasma membrane	33.87	11.9
TraesCS7B01G321900.1	Wheat	cytosol	27.16	9.8
TraesCS7D01G413800.1	Wheat	cytosol	19.17	9.68
TraesCS7B01G322000.1	Wheat	cytosol	27.16	9.66
TraesCS7A01G421700.1	Wheat	cytosol	26.52	9.43
KRH30269	Soybean	cytosol	5.43	8.29
TraesCS7A01G421600.1	Wheat	mitochondrion	20.13	7.71
TraesCS7D01G413900.1	Wheat	mitochondrion	19.17	7.22
HORVU7Hr1G097500.16	Barley	endoplasmic reticulum, golgi, plasma membrane	9.58	5.12
CDY12178	Canola	cytosol	9.58	3.02
CDX79472	Canola	cytosol, plastid	9.58	3.0
CDY19162	Canola	extracellular	9.58	2.99
CDX84724	Canola	cytosol, plastid	9.58	2.99
CDY23791	Canola	cytosol, plastid	9.58	2.98
CDY60623	Canola	endoplasmic reticulum, golgi	8.63	2.79
GSMUA_Achr1P10580_001	Banana	cytosol, nucleus, plasma membrane	0.96	2.07
KRH57675	Soybean	cytosol	0.96	0.99

Protein Annotations

EnsemblPlants:CDY33144	EnsemblPlantsGene:GSBRNA2T00053840001	ncoils:Coil	PANTHER:PTHR10943	PANTHER:PTHR10943:SF8	ProteinID:CDY33144
ProteinID:CDY33144.1	SEG:seg	UniParc:UPI0004EE6F35	UniProt:A0A078H6J4	MapMan:35.1	:

Description

BnaCnng07150DBnaCnng07150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6J4]

Coordinates

chrLK032307:+:235781..237967

Molecular Weight (calculated)

35582.7 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.767

Length

313 amino acids

Sequence
(BLAST)

001: MLMMLVQEAH AFALGLLGFT FRSAENPFDQ SIHPPQFIEM APGPDPNRVG DGAKRDETTT KVPSKDPKKK DDKKEEDLSE EDLQLKQNLE LYVERVQDPN
101: PELQKASLES MRQEIRASTS SMTSVPKPLK FLRPHYGTLK EFHKNMVESD LKESLGYMLT GSEGDIGSWG HEYVRNLAGE IAEEYTVRQV RKQLFMSSLC
201: LAFLCRMSLT YLDITDCYML DRMPKRLGAS VRTLGQNIGA KDTASRRLPE NFNLDEATVK EMRKQEEIAK AKLAMESKKK LAEKAAAKAA IRAQKEAEKK
301: EQKEREKAKH DPQ

Best Arabidopsis Sequence Match ( AT2G20580.1 )
(BLAST)

001: MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E

Arabidopsis Description

RPN1ARPN1A [Source:UniProtKB/TrEMBL;Acc:A0A178VZC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.