Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plasma membrane 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G413800.1 | Wheat | cytosol | 66.1 | 87.1 |
| TraesCS7B01G321900.1 | Wheat | cytosol | 91.55 | 86.27 |
| TraesCS7A01G421700.1 | Wheat | cytosol | 81.76 | 75.91 |
| HORVU7Hr1G097500.16 | Barley | endoplasmic reticulum, golgi, plasma membrane | 50.06 | 69.8 |
| Os09t0326800-01 | Rice | plasma membrane | 68.79 | 63.08 |
| Os06t0699900-01 | Rice | plasma membrane | 68.91 | 62.49 |
| TraesCS6A01G116500.1 | Wheat | golgi, unclear | 67.56 | 61.68 |
| Solyc07g053650.2.1 | Tomato | nucleus | 60.95 | 60.58 |
| GSMUA_Achr11P... | Banana | cytosol | 64.99 | 59.8 |
| KRH55899 | Soybean | endoplasmic reticulum, nucleus | 60.83 | 56.16 |
| KRH25643 | Soybean | endoplasmic reticulum, nucleus | 60.83 | 56.16 |
| Solyc10g008180.1.1 | Tomato | plastid | 50.06 | 55.95 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 60.83 | 55.84 |
| PGSC0003DMT400024306 | Potato | cytosol | 60.95 | 55.58 |
| AT4G28470.1 | Thale cress | cytosol | 59.98 | 54.99 |
| CDY38389 | Canola | cytosol, extracellular | 59.85 | 54.82 |
| Bra011030.1-P | Field mustard | cytosol | 59.61 | 54.66 |
| CDY35187 | Canola | cytosol, extracellular | 59.61 | 54.6 |
| AT2G20580.1 | Thale cress | cytosol | 59.49 | 54.55 |
| Bra024200.1-P | Field mustard | cytosol | 59.49 | 54.55 |
| CDY29907 | Canola | extracellular | 59.36 | 54.43 |
| CDY05774 | Canola | cytosol | 59.61 | 54.35 |
| CDX92875 | Canola | extracellular | 59.24 | 54.32 |
| CDX97442 | Canola | cytosol | 58.02 | 53.68 |
| Bra010366.1-P | Field mustard | cytosol | 58.02 | 53.5 |
| Bra036488.1-P | Field mustard | cytosol, extracellular, plasma membrane | 54.35 | 53.3 |
| CDY14239 | Canola | cytosol, extracellular | 57.77 | 53.15 |
| KRH57774 | Soybean | endoplasmic reticulum, plasma membrane | 18.97 | 53.08 |
| CDY31952 | Canola | plasma membrane | 55.32 | 52.8 |
| KRH57675 | Soybean | cytosol | 17.26 | 46.53 |
| AT4G08140.1 | Thale cress | cytosol | 3.79 | 36.9 |
| Solyc10g008170.2.1 | Tomato | cytosol | 8.32 | 33.66 |
| PGSC0003DMT400056260 | Potato | cytosol | 7.34 | 33.33 |
| KRH30269 | Soybean | cytosol | 7.59 | 30.24 |
| CDY72396 | Canola | cytosol | 3.92 | 22.22 |
| CDX99107 | Canola | cytosol | 6.49 | 20.46 |
| CDY33144 | Canola | extracellular | 7.71 | 20.13 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 3.43 | 19.31 |
| CDY65736 | Canola | extracellular | 9.06 | 18.23 |
| Bra003811.1-P | Field mustard | endoplasmic reticulum | 4.9 | 16.26 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 14.44 | 12.54 |
| TraesCS2A01G430100.2 | Wheat | golgi | 15.54 | 12.21 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.1 | InterPro:26S_Psome_Rpn1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | InterPro:IPR011989 |
| PIRSF:PIRSF015965 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF8 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS7A01G421600 | EnsemblPlants:TraesCS7A01G421600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:612577843..612585079
Molecular Weight (calculated)
89642.4 Da
IEP (calculated)
6.895
GRAVY (calculated)
0.082
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVPKPLKF LRAHYGTLKA CFQRMRDPAQ KKHMADILSV LALTASAEGE RESLKYCMMG SLVDICSWGH EYVRNLAFEI GEEWKFNDSS TPIESKIKLV
101: LEIVKFHMKH NAETEALDFL MKVGYLELLS DEKKEEYIMR LLHLVDSTNY KRACLYLTSC SKYLSTPDHK ATLDIAYDMY MKFRDLGSAL RIVLLVNDHK
201: YCGQNVKMKK VFAETKDFSL KQQFAFMIAR YGLSMEIDDE MVADENEKNA LQEVVYNTKL SKGYHILARD IGVMEPKSPE DIYKVHLIGS RGTKSSSLDS
301: ARPNLAAIFV NAFVNAGYCQ DKLMTAIPDS LLFKNNELWR ASVVASLGMI HMWDPDSGFP KLDKYLHSND TNVVAGTFLG IGIVSSGVKN YRDHALALIS
401: EYSKGAASVT RIGGFLGLGI AYAGSRKDEL KSHFSSTLSN PQTPLEDLVF SAISLGLVFV GSCNEEIAES IISVLKNHSK ELTEPIIHLL PVALGLLYLG
501: KQEMVVATAA KVSETLEEPL KKYCGLTLTS LAYAGTGNVL KVQELLCSCS DKLVKGGSDQ GPAVLGIALI AMAEGLGAEM AVRSLEQLLQ YGDCSIRRAV
601: PLALGMLCIS NPKAVVVDTL NRLSHDADGA VSMAAIISLG LIGAGTNNAR IAGLLRKLSS QQYGGYLYCV RIAQGLVHLG KGLLTLDPCH SDRLLLSPVA
701: LAGLATVLYA CLDMQPIIVE KYPYMLYILA LAMQPRMLLT VDEDLKPLHV PVRVGQAVDV VGQAGSPRTI TGFQTYNTPV VLAAGEQAEL ATEKYIPLTP
801: VLEGFVILRK NPEHHED
101: LEIVKFHMKH NAETEALDFL MKVGYLELLS DEKKEEYIMR LLHLVDSTNY KRACLYLTSC SKYLSTPDHK ATLDIAYDMY MKFRDLGSAL RIVLLVNDHK
201: YCGQNVKMKK VFAETKDFSL KQQFAFMIAR YGLSMEIDDE MVADENEKNA LQEVVYNTKL SKGYHILARD IGVMEPKSPE DIYKVHLIGS RGTKSSSLDS
301: ARPNLAAIFV NAFVNAGYCQ DKLMTAIPDS LLFKNNELWR ASVVASLGMI HMWDPDSGFP KLDKYLHSND TNVVAGTFLG IGIVSSGVKN YRDHALALIS
401: EYSKGAASVT RIGGFLGLGI AYAGSRKDEL KSHFSSTLSN PQTPLEDLVF SAISLGLVFV GSCNEEIAES IISVLKNHSK ELTEPIIHLL PVALGLLYLG
501: KQEMVVATAA KVSETLEEPL KKYCGLTLTS LAYAGTGNVL KVQELLCSCS DKLVKGGSDQ GPAVLGIALI AMAEGLGAEM AVRSLEQLLQ YGDCSIRRAV
601: PLALGMLCIS NPKAVVVDTL NRLSHDADGA VSMAAIISLG LIGAGTNNAR IAGLLRKLSS QQYGGYLYCV RIAQGLVHLG KGLLTLDPCH SDRLLLSPVA
701: LAGLATVLYA CLDMQPIIVE KYPYMLYILA LAMQPRMLLT VDEDLKPLHV PVRVGQAVDV VGQAGSPRTI TGFQTYNTPV VLAAGEQAEL ATEKYIPLTP
801: VLEGFVILRK NPEHHED
001: MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
Arabidopsis Description
RPN1ARPN1A [Source:UniProtKB/TrEMBL;Acc:A0A178VZC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.