Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- plasma membrane 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G421700.1 | Wheat | cytosol | 98.56 | 93.07 |
| TraesCS7B01G322000.1 | Wheat | cytosol | 96.15 | 90.8 |
| TraesCS7D01G413800.1 | Wheat | cytosol | 57.28 | 76.77 |
| HORVU7Hr1G097500.16 | Barley | endoplasmic reticulum, golgi, plasma membrane | 46.09 | 65.36 |
| Os09t0326800-01 | Rice | plasma membrane | 69.07 | 64.42 |
| Os06t0699900-01 | Rice | plasma membrane | 69.19 | 63.82 |
| TraesCS6D01G105500.1 | Wheat | golgi | 67.99 | 63.13 |
| Solyc07g053650.2.1 | Tomato | nucleus | 60.89 | 61.56 |
| GSMUA_Achr11P... | Banana | cytosol | 64.86 | 60.7 |
| KRH55899 | Soybean | endoplasmic reticulum, nucleus | 61.13 | 57.4 |
| KRH25643 | Soybean | endoplasmic reticulum, nucleus | 61.13 | 57.4 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 61.37 | 57.3 |
| Solyc10g008180.1.1 | Tomato | plastid | 49.94 | 56.77 |
| PGSC0003DMT400024306 | Potato | cytosol | 60.89 | 56.47 |
| AT4G28470.1 | Thale cress | cytosol | 59.45 | 55.44 |
| CDY38389 | Canola | cytosol, extracellular | 59.09 | 55.04 |
| AT2G20580.1 | Thale cress | cytosol | 58.97 | 54.99 |
| Bra011030.1-P | Field mustard | cytosol | 58.84 | 54.88 |
| CDY35187 | Canola | cytosol, extracellular | 58.84 | 54.82 |
| CDY05774 | Canola | cytosol | 59.09 | 54.8 |
| Bra024200.1-P | Field mustard | cytosol | 58.6 | 54.66 |
| CDY29907 | Canola | extracellular | 58.48 | 54.55 |
| Bra036488.1-P | Field mustard | cytosol, extracellular, plasma membrane | 54.63 | 54.5 |
| CDX92875 | Canola | extracellular | 58.24 | 54.32 |
| Bra010366.1-P | Field mustard | cytosol | 57.64 | 54.06 |
| CDY14239 | Canola | cytosol, extracellular | 57.52 | 53.83 |
| KRH57774 | Soybean | endoplasmic reticulum, plasma membrane | 18.89 | 53.77 |
| CDY31952 | Canola | plasma membrane | 55.35 | 53.74 |
| CDX97442 | Canola | cytosol | 56.8 | 53.45 |
| KRH57675 | Soybean | cytosol | 16.85 | 46.2 |
| AT4G08140.1 | Thale cress | cytosol | 3.73 | 36.9 |
| PGSC0003DMT400056260 | Potato | cytosol | 7.22 | 33.33 |
| Solyc10g008170.2.1 | Tomato | cytosol | 7.82 | 32.18 |
| KRH30269 | Soybean | cytosol | 7.82 | 31.71 |
| CDY72396 | Canola | cytosol | 3.97 | 22.92 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 3.37 | 19.31 |
| CDX99107 | Canola | cytosol | 6.02 | 19.3 |
| CDY33144 | Canola | extracellular | 7.22 | 19.17 |
| CDY65736 | Canola | extracellular | 8.66 | 17.73 |
| Bra003811.1-P | Field mustard | endoplasmic reticulum | 4.57 | 15.45 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 16.0 | 13.27 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 16.25 | 13.09 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.1 | InterPro:26S_Psome_Rpn1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PIRSF:PIRSF015965 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF8 | InterPro:Proteasome/cyclosome_rpt |
| SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS7D01G413900 | EnsemblPlants:TraesCS7D01G413900.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:+:532361554..532368253
Molecular Weight (calculated)
91276.2 Da
IEP (calculated)
5.364
GRAVY (calculated)
0.136
Length
831 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVPKPLKF LRAHYGTLKA CFQRMRDPAQ KKHMADILSV LALTASAEGE RESLKYCMMG SLVDICSWGH VYVRNLAFEI GKEWKDNGSS TPIESKIELV
101: LEIVKFHMKH NAETEALDLL MEVGYLEMLF DEKYEEYLAR LFCLVDSTNY KRACLYLTTS SKYLLTPDRE AYEATLYIAF GMYGKFRDLA SALRIVLLVN
201: DDKCCDQSVK IVFAETEDFS LKQQLAFMIA RYGLSMEVDD EMVADENEKN ALQEIVNNTK LSEQYHMLAW DIGVMEPKSP EDIYKVHLIG SQGAKSSSLD
301: SARQNLAATF VNAFVNAGYC QDKLMTAISD SSENLLFEKN ELGKASAVAS LGMIHLWDHD SGFAILDKYL QSDDTHVVAG ALLGIGIVSC GVKNDYDPAL
401: ALISGYSTSA ASITRIGAIL GLGIAYAGSR KDKLKSLFLI TLSDSQAPLV DLVFSAISLG LVFVGSCNEE IAQSIISVLK NLIKAELAEP IIRLLPVSIG
501: LLYLGKQEGP KANVVKVSET FDEIMKEVSK TFDKIMKDYW DVTLMSLAYA GTGNVLKVQE LLSICSKKEG GSHQGPAVLG IALIAMAEEL GVEMAVRSLE
601: QLFKYGDYNI RRAVPLALGM LYISNPKVDV VDTLSRLSND ADGQVMMAAT ISLGLIGAGT NNARIAELLR KLSSQEHGVY LFCVRIAQGL VHLGKGLLTL
701: APYHSDRLLL SPVALAGLVT VLHACLNMQP TILGEYPYML YILALAMQPR MLLTLDEDLK PLPVPVHVGQ AVDVVSQAGS PRTITGFQTH NTPVLLAAGE
801: RAELATEKYI PLTPILEGFV ILRKNPEHHE D
101: LEIVKFHMKH NAETEALDLL MEVGYLEMLF DEKYEEYLAR LFCLVDSTNY KRACLYLTTS SKYLLTPDRE AYEATLYIAF GMYGKFRDLA SALRIVLLVN
201: DDKCCDQSVK IVFAETEDFS LKQQLAFMIA RYGLSMEVDD EMVADENEKN ALQEIVNNTK LSEQYHMLAW DIGVMEPKSP EDIYKVHLIG SQGAKSSSLD
301: SARQNLAATF VNAFVNAGYC QDKLMTAISD SSENLLFEKN ELGKASAVAS LGMIHLWDHD SGFAILDKYL QSDDTHVVAG ALLGIGIVSC GVKNDYDPAL
401: ALISGYSTSA ASITRIGAIL GLGIAYAGSR KDKLKSLFLI TLSDSQAPLV DLVFSAISLG LVFVGSCNEE IAQSIISVLK NLIKAELAEP IIRLLPVSIG
501: LLYLGKQEGP KANVVKVSET FDEIMKEVSK TFDKIMKDYW DVTLMSLAYA GTGNVLKVQE LLSICSKKEG GSHQGPAVLG IALIAMAEEL GVEMAVRSLE
601: QLFKYGDYNI RRAVPLALGM LYISNPKVDV VDTLSRLSND ADGQVMMAAT ISLGLIGAGT NNARIAELLR KLSSQEHGVY LFCVRIAQGL VHLGKGLLTL
701: APYHSDRLLL SPVALAGLVT VLHACLNMQP TILGEYPYML YILALAMQPR MLLTLDEDLK PLPVPVHVGQ AVDVVSQAGS PRTITGFQTH NTPVLLAAGE
801: RAELATEKYI PLTPILEGFV ILRKNPEHHE D
001: MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
Arabidopsis Description
RPN1ARPN1A [Source:UniProtKB/TrEMBL;Acc:A0A178VZC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.