Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G078200.1 | Wheat | cytosol | 98.98 | 98.98 |
| Zm00001d053930_P001 | Maize | cytosol | 90.1 | 90.41 |
| EES04403 | Sorghum | cytosol | 88.4 | 88.4 |
| VIT_15s0045g00310.t01 | Wine grape | cytosol | 87.37 | 87.07 |
| PGSC0003DMT400075349 | Potato | cytosol | 86.35 | 86.05 |
| KRH36887 | Soybean | cytosol, nucleus | 86.35 | 86.05 |
| Solyc12g095860.1.1 | Tomato | cytosol, nucleus | 86.01 | 85.71 |
| KRH11866 | Soybean | cytosol, nucleus | 86.01 | 85.71 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 85.67 | 85.37 |
| AT3G48750.1 | Thale cress | cytosol | 84.98 | 84.69 |
| Bra018036.1-P | Field mustard | cytosol | 84.64 | 84.35 |
| GSMUA_Achr11P... | Banana | cytosol | 84.64 | 84.35 |
| CDX68497 | Canola | cytosol | 84.64 | 84.35 |
| KRH42252 | Soybean | cytosol | 83.96 | 83.67 |
| KRH58370 | Soybean | cytosol | 85.67 | 83.67 |
| Solyc11g070140.1.1 | Tomato | cytosol | 80.2 | 79.93 |
| GSMUA_Achr8P00030_001 | Banana | cytosol | 83.96 | 79.87 |
| Bra029917.1-P | Field mustard | cytosol | 84.98 | 79.81 |
| CDX87018 | Canola | cytosol | 64.51 | 79.75 |
| CDX83047 | Canola | cytosol | 84.64 | 79.49 |
| Solyc08g066330.1.1 | Tomato | cytosol | 81.57 | 77.85 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 97.95 | 77.57 |
| PGSC0003DMT400047738 | Potato | cytosol | 76.79 | 74.26 |
| CDY66197 | Canola | cytosol | 84.64 | 73.37 |
| Os02t0123100-01 | Rice | mitochondrion | 91.47 | 71.28 |
| PGSC0003DMT400077428 | Potato | cytosol | 72.01 | 70.81 |
| CDY05870 | Canola | cytosol, plastid | 83.96 | 64.91 |
| TraesCS5B01G144100.2 | Wheat | cytosol | 57.34 | 55.26 |
| TraesCS4B01G123100.1 | Wheat | cytosol | 57.68 | 54.69 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 53.92 | 48.47 |
| CDY67496 | Canola | cytosol | 51.19 | 47.47 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 46.76 | 32.31 |
| TraesCS1B01G212800.1 | Wheat | cytosol | 45.39 | 28.3 |
| TraesCS5B01G536500.1 | Wheat | cytosol | 35.84 | 23.7 |
| TraesCS6B01G296700.2 | Wheat | cytosol | 36.18 | 23.04 |
| TraesCS6B01G244100.1 | Wheat | nucleus | 46.08 | 20.18 |
| TraesCS2B01G364800.5 | Wheat | nucleus | 47.1 | 18.78 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.1 | MapMan:18.4.3.1.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF323 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS6B01G105100 | EnsemblPlants:TraesCS6B01G105100.1 | TIGR:cd07835 | : |
Description
No Description!
Coordinates
chr6B:+:84611088..84614024
Molecular Weight (calculated)
33870.9 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.280
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYEKVEKI GEGTYGVVYK AKDRYTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH RNIVRLQDVV HNEKCIYLVF EYLDLDLKKH MDSSSDFKNH
101: HIVKSFLYQI LRGIAYCHSH RVLHRDLKPQ NLLIDRRTNS LKLADFGLAR AFGIPVRTFT HEVVTLWYRA PEILLGVRQY STPVDVWSVG CIFAEMVNQK
201: PLFPGDSEID ELFKIFRIMG TPNEETWPGV SSLPDYKSAF PKWPSVDLAT VVPTLEPLGL DLLSKMLCLD PTRRINARTA LEHEYFKDLD VSS
101: HIVKSFLYQI LRGIAYCHSH RVLHRDLKPQ NLLIDRRTNS LKLADFGLAR AFGIPVRTFT HEVVTLWYRA PEILLGVRQY STPVDVWSVG CIFAEMVNQK
201: PLFPGDSEID ELFKIFRIMG TPNEETWPGV SSLPDYKSAF PKWPSVDLAT VVPTLEPLGL DLLSKMLCLD PTRRINARTA LEHEYFKDLD VSS
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.