Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G121200.2 | Wheat | cytosol | 99.35 | 99.35 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 98.71 | 98.71 |
| Os01t0897000-01 | Rice | cytosol | 87.7 | 89.44 |
| TraesCS5B01G144100.2 | Wheat | cytosol | 86.41 | 87.83 |
| EES15619 | Sorghum | cytosol | 84.14 | 84.42 |
| GSMUA_Achr11P... | Banana | cytosol | 82.2 | 83.83 |
| PGSC0003DMT400071215 | Potato | cytosol | 78.96 | 80.53 |
| Solyc10g074720.1.1 | Tomato | cytosol, nucleus | 77.99 | 79.54 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 97.41 | 79.42 |
| VIT_08s0056g00210.t01 | Wine grape | cytosol | 77.35 | 78.88 |
| Zm00001d044672_P005 | Maize | cytosol | 82.85 | 77.34 |
| CDY07716 | Canola | cytosol | 75.4 | 75.4 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 75.73 | 74.52 |
| AT3G54180.1 | Thale cress | cytosol | 74.43 | 74.43 |
| Bra000077.1-P | Field mustard | cytosol, nucleus, plasma membrane | 75.08 | 74.36 |
| AT2G38620.2 | Thale cress | cytosol | 74.76 | 74.28 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 74.43 | 74.19 |
| CDX76164 | Canola | cytosol | 72.82 | 74.01 |
| Bra014835.1-P | Field mustard | cytosol | 72.82 | 74.01 |
| CDY13189 | Canola | cytosol | 72.49 | 73.68 |
| GSMUA_Achr4P02420_001 | Banana | cytosol | 56.63 | 72.61 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 66.02 | 62.58 |
| TraesCS6B01G105100.1 | Wheat | cytosol | 54.69 | 57.68 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 54.69 | 57.48 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 38.51 | 28.07 |
| TraesCS1B01G212800.1 | Wheat | cytosol | 40.78 | 26.81 |
| TraesCS5B01G536500.1 | Wheat | cytosol | 33.33 | 23.25 |
| TraesCS6B01G296700.2 | Wheat | cytosol | 32.36 | 21.74 |
| TraesCS6B01G244100.1 | Wheat | nucleus | 40.13 | 18.54 |
| TraesCS2B01G364800.5 | Wheat | nucleus | 41.75 | 17.55 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF11 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS4B01G123100 | EnsemblPlants:TraesCS4B01G123100.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4B:-:146494814..146498491
Molecular Weight (calculated)
34694.3 Da
IEP (calculated)
8.958
GRAVY (calculated)
-0.202
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKYEKLEKV GEGTYGKVYK AQDKATGQVV ALKKTRLEMD DEGIPPTALR EISLLRLLSS SLYVVRLLAV EQATKGGGAG GGGKPVLYLV FEFLDTDLKK
101: FVDAYRRGPA PKPLPTQVVK SFLYQLCKGI AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTGV
201: DIWSIGCIFA EMVRKQALFP GDSELQQLLH MFKLLGTPTE EDWPGVTALR DWHEFPQWKA QRLTRAVPTL EPEGIDLLSK MLQFDPANRI SAKAALEHPY
301: FNSLDKSQF
101: FVDAYRRGPA PKPLPTQVVK SFLYQLCKGI AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTGV
201: DIWSIGCIFA EMVRKQALFP GDSELQQLLH MFKLLGTPTE EDWPGVTALR DWHEFPQWKA QRLTRAVPTL EPEGIDLLSK MLQFDPANRI SAKAALEHPY
301: FNSLDKSQF
001: MEKYEKLEKV GEGTYGKVYK AMEKGTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLST SIYVVRLLCV EHVHQPSTKS QSTKSNLYLV FEYLDTDLKK
101: FIDSYRKGPN PKPLEPFLIQ KLMFQLCKGV AHCHSHGVLH RDLKPQNLLL VKDKELLKIA DLGLGRAFTV PLKSYTHEIV TLWYRAPEVL LGSTHYSTGV
201: DMWSVGCIFA EMVRRQALFP GDSEFQQLLH IFRLLGTPTE QQWPGVSTLR DWHVYPKWEP QDLTLAVPSL SPQGVDLLTK MLKYNPAERI SAKTALDHPY
301: FDSLDKSQF
101: FIDSYRKGPN PKPLEPFLIQ KLMFQLCKGV AHCHSHGVLH RDLKPQNLLL VKDKELLKIA DLGLGRAFTV PLKSYTHEIV TLWYRAPEVL LGSTHYSTGV
201: DMWSVGCIFA EMVRRQALFP GDSEFQQLLH IFRLLGTPTE QQWPGVSTLR DWHVYPKWEP QDLTLAVPSL SPQGVDLLTK MLKYNPAERI SAKTALDHPY
301: FDSLDKSQF
Arabidopsis Description
CDKB1-1Cyclin-dependent kinase B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25859]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.