Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G121200.2 | Wheat | cytosol | 79.42 | 97.41 |
| TraesCS4B01G123100.1 | Wheat | cytosol | 79.42 | 97.41 |
| TraesCS4A01G192300.1 | Wheat | cytosol | 78.89 | 96.76 |
| Os01t0897000-01 | Rice | cytosol | 70.71 | 88.45 |
| EES15619 | Sorghum | cytosol | 67.81 | 83.44 |
| GSMUA_Achr11P... | Banana | cytosol | 66.49 | 83.17 |
| PGSC0003DMT400071215 | Potato | cytosol | 64.12 | 80.2 |
| Solyc10g074720.1.1 | Tomato | cytosol, nucleus | 63.32 | 79.21 |
| Zm00001d044672_P005 | Maize | cytosol | 68.87 | 78.85 |
| VIT_08s0056g00210.t01 | Wine grape | cytosol | 62.8 | 78.55 |
| HORVU5Hr1G046190.1 | Barley | plastid | 76.25 | 77.48 |
| CDY07716 | Canola | cytosol | 61.48 | 75.4 |
| AT3G54180.1 | Thale cress | cytosol | 60.69 | 74.43 |
| AT2G38620.2 | Thale cress | cytosol | 60.95 | 74.28 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 60.69 | 74.19 |
| Bra000077.1-P | Field mustard | cytosol, nucleus, plasma membrane | 60.95 | 74.04 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 60.95 | 73.57 |
| Bra014835.1-P | Field mustard | cytosol | 58.58 | 73.03 |
| CDX76164 | Canola | cytosol | 58.58 | 73.03 |
| CDY13189 | Canola | cytosol | 58.31 | 72.7 |
| GSMUA_Achr4P02420_001 | Banana | cytosol | 46.17 | 72.61 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 51.45 | 58.38 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 44.33 | 49.27 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 46.7 | 47.84 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 31.4 | 28.0 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 32.45 | 26.17 |
| HORVU5Hr1G120960.2 | Barley | cytosol | 27.18 | 23.36 |
| HORVU6Hr1G068270.1 | Barley | cytosol | 26.39 | 21.69 |
| HORVU0Hr1G016660.4 | Barley | cytosol | 26.39 | 21.69 |
| HORVU7Hr1G008690.3 | Barley | endoplasmic reticulum, plasma membrane | 26.91 | 20.4 |
| HORVU6Hr1G054600.5 | Barley | nucleus | 33.51 | 18.7 |
| HORVU2Hr1G084400.1 | Barley | nucleus | 35.09 | 17.66 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.2 | MapMan:18.4.3.1.2 | Gene3D:3.30.200.20 | UniProt:A0A287NJ84 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G023490 | EnsemblPlants:HORVU4Hr1G023490.7 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF11 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000B462C70 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:127103764..127107440
Molecular Weight (calculated)
42458.8 Da
IEP (calculated)
9.520
GRAVY (calculated)
-0.170
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: GGPAHLQLVT FVQCATCHAQ SLDPFLSILF PLIPFQNFQI HLGFAPPPSA PHRTGRIERG RRRTRTVGSA MEKYEKLEKV GEGTYGKVYK AMDKATGQVV
101: ALKKTRLEMD DEGIPPTALR EISLLRLLSS SLYVVRLLAV EQTTKGGGAG GGGKPVLYLV FEFLDTDLKK FVDAYRRGPA PKPLPTHVVK SFLYQLCKGI
201: AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTGV DIWSIGCIFA EMVRKQALFP GDSELQQLLH
301: IFRLMGTPTE EDWPGVTALR DWHEFPQWKA QRMTRAVPTL ETEGIDLLSK MLQFDPANRI SAKAALEHPY FNSLDKSQF
101: ALKKTRLEMD DEGIPPTALR EISLLRLLSS SLYVVRLLAV EQTTKGGGAG GGGKPVLYLV FEFLDTDLKK FVDAYRRGPA PKPLPTHVVK SFLYQLCKGI
201: AHCHGHGVLH RDLKPQNLLV DKEKMILKIA DLGLSRAFTV PMKSYTHEIV TLWYRAPEVL LGATHYSTGV DIWSIGCIFA EMVRKQALFP GDSELQQLLH
301: IFRLMGTPTE EDWPGVTALR DWHEFPQWKA QRMTRAVPTL ETEGIDLLSK MLQFDPANRI SAKAALEHPY FNSLDKSQF
001: MEKYEKLEKV GEGTYGKVYK AMEKGTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLST SIYVVRLLCV EHVHQPSTKS QSTKSNLYLV FEYLDTDLKK
101: FIDSYRKGPN PKPLEPFLIQ KLMFQLCKGV AHCHSHGVLH RDLKPQNLLL VKDKELLKIA DLGLGRAFTV PLKSYTHEIV TLWYRAPEVL LGSTHYSTGV
201: DMWSVGCIFA EMVRRQALFP GDSEFQQLLH IFRLLGTPTE QQWPGVSTLR DWHVYPKWEP QDLTLAVPSL SPQGVDLLTK MLKYNPAERI SAKTALDHPY
301: FDSLDKSQF
101: FIDSYRKGPN PKPLEPFLIQ KLMFQLCKGV AHCHSHGVLH RDLKPQNLLL VKDKELLKIA DLGLGRAFTV PLKSYTHEIV TLWYRAPEVL LGSTHYSTGV
201: DMWSVGCIFA EMVRRQALFP GDSEFQQLLH IFRLLGTPTE QQWPGVSTLR DWHVYPKWEP QDLTLAVPSL SPQGVDLLTK MLKYNPAERI SAKTALDHPY
301: FDSLDKSQF
Arabidopsis Description
CDKB1-1Cyclin-dependent kinase B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25859]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.