Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G001680.1 | Barley | nucleus | 91.81 | 98.12 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 88.6 | 72.14 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 89.18 | 69.63 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 83.63 | 65.6 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 83.63 | 65.6 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 83.33 | 65.37 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 83.33 | 65.22 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 83.04 | 65.14 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 81.29 | 62.75 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 81.29 | 62.75 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 28.66 | 49.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.11 | 48.32 |
| Os05t0493500-00 | Rice | nucleus | 66.67 | 46.82 |
| Zm00001d010656_P001 | Maize | nucleus | 59.65 | 45.74 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 60.53 | 45.7 |
| EES18429 | Sorghum | mitochondrion | 61.11 | 45.43 |
| PGSC0003DMT400058457 | Potato | nucleus | 54.39 | 44.5 |
| PGSC0003DMT400018480 | Potato | nucleus | 53.22 | 42.82 |
| Solyc01g009040.2.1 | Tomato | nucleus | 54.39 | 42.76 |
| AT2G26760.1 | Thale cress | nucleus | 48.25 | 42.64 |
| Solyc10g078330.1.1 | Tomato | nucleus | 51.75 | 41.84 |
| KRH73516 | Soybean | nucleus | 53.22 | 41.36 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 50.29 | 41.15 |
| Solyc06g073610.2.1 | Tomato | nucleus | 52.92 | 41.14 |
| PGSC0003DMT400015245 | Potato | nucleus | 52.63 | 41.0 |
| KRH14611 | Soybean | nucleus | 52.63 | 41.0 |
| CDY69551 | Canola | nucleus | 41.81 | 40.28 |
| KRH66715 | Soybean | nucleus | 45.61 | 39.8 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 52.63 | 39.74 |
| CDY62475 | Canola | nucleus | 40.64 | 39.6 |
| Bra002046.1-P | Field mustard | nucleus | 45.32 | 39.44 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 52.92 | 39.18 |
| KRG95055 | Soybean | nucleus | 52.05 | 39.12 |
| KRH66718 | Soybean | plastid | 42.11 | 38.61 |
| KRH66713 | Soybean | nucleus | 51.17 | 38.55 |
| Solyc10g080950.1.1 | Tomato | nucleus | 52.05 | 38.53 |
| PGSC0003DMT400072211 | Potato | nucleus | 51.46 | 37.93 |
| AT3G11520.1 | Thale cress | nucleus | 45.61 | 37.68 |
| Bra028741.1-P | Field mustard | nucleus | 45.61 | 37.59 |
| AT4G37490.1 | Thale cress | nucleus | 46.78 | 37.38 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 45.03 | 37.2 |
| CDX69311 | Canola | nucleus | 45.32 | 36.99 |
| CDX75659 | Canola | nucleus | 45.32 | 36.22 |
| Bra011769.1-P | Field mustard | nucleus | 45.32 | 36.22 |
| CDX80988 | Canola | plastid | 45.03 | 35.98 |
| CDY11354 | Canola | plastid | 45.32 | 35.8 |
| KRG95056 | Soybean | cytosol | 40.35 | 35.66 |
| AT5G06150.1 | Thale cress | nucleus | 45.03 | 34.61 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 26.61 | 32.73 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 47.08 | 32.72 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 36.26 | 29.52 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 31.58 | 28.95 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 38.89 | 28.24 |
| CDY14091 | Canola | plastid | 45.91 | 23.93 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 30.41 | 22.91 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 27.78 | 22.89 |
| HORVU3Hr1G114440.21 | Barley | nucleus, plastid | 33.63 | 22.68 |
| CDY04980 | Canola | nucleus | 45.61 | 21.73 |
| AT1G34460.5 | Thale cress | cytosol | 28.95 | 19.88 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G068080.1 | EnsemblPlantsGene:HORVU1Hr1G068080 | Gene3D:1.10.472.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF267 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | SEG:seg | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000B470AEF | UniProt:A0A287G2C7 | MapMan:13.1.1.1.2 | : |
Description
No Description!
Coordinates
chrchr1H:+:480050329..480052153
Molecular Weight (calculated)
36786.6 Da
IEP (calculated)
7.234
GRAVY (calculated)
-0.149
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIXXXXXX XXXXXXXXXX APRPEPAAKI VTASDENRKP SEGGAPKISR KKAVHTLTTV LNHRSKEACV HDIDKLDSDN ELAVVDYIDD IYKYYKVAQH
101: ECRPIDYMGS QPEISPKMRA ILTDWLVEVT HKFELMPESL YLTMYAIDRF LSLQAVPRRE LQLVGMAAML IACKYEEIWA PEVNDFISIA DNAYSRQQVL
201: SMEKNMLNSM EWNLTVPTPY VFLVRFAKAA GSDKELEEMI FFFAEMALME YGLVTARPSL VAASAVYAAR CTLKRSPIWT ETLKHHTGLT EAQLLEPARV
301: LVMAHATAPE SKLKAIYRKY SSEQYGRVAL RPPAVAAPQR LA
101: ECRPIDYMGS QPEISPKMRA ILTDWLVEVT HKFELMPESL YLTMYAIDRF LSLQAVPRRE LQLVGMAAML IACKYEEIWA PEVNDFISIA DNAYSRQQVL
201: SMEKNMLNSM EWNLTVPTPY VFLVRFAKAA GSDKELEEMI FFFAEMALME YGLVTARPSL VAASAVYAAR CTLKRSPIWT ETLKHHTGLT EAQLLEPARV
301: LVMAHATAPE SKLKAIYRKY SSEQYGRVAL RPPAVAAPQR LA
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.