Factsheet for Bra028741.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006369.1-P
Bra007982.1-P
Bra007983.1-P
Bra009841.1-P
Bra012258.1-P
Bra013838.1-P
Bra014835.1-P
Bra016143.1-P
Bra017408.1-P
Bra018762.1-P
Bra018764.1-P
Bra020500.1-P
Bra026274.1-P
Bra032269.1-P
Bra032422.1-P
Bra034380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06150.1	Bra012258.1-P	AT1G20930.1	20706207
AT5G06150.1	Bra018762.1-P	AT1G48920.1	20706207
AT5G06150.1	Bra018764.1-P	AT1G48920.1	20706207
AT5G06150.1	Bra032269.1-P	AT1G48920.1	20706207
AT5G06150.1	Bra007982.1-P	AT1G71380.1	20706207
AT5G06150.1	Bra007983.1-P	AT1G71380.1	20706207
AT5G06150.1	Bra016143.1-P	AT1G71380.1	20706207
AT5G06150.1	Bra034380.1-P	AT2G27970.1	20706207
AT5G06150.1	Bra006369.1-P	AT3G11270.1	20706207
AT5G06150.1	Bra017408.1-P	AT3G11270.1	20706207
AT5G06150.1	Bra032422.1-P	AT3G11270.1	20706207
AT5G06150.1	Bra014835.1-P	AT3G54180.1	20706207
AT5G06150.1	Bra013838.1-P	AT4G24820.1	20706207
AT5G06150.1	Bra026274.1-P	AT4G28230.1	20706207
AT5G06150.1	Bra009841.1-P	AT5G25460.1	20706207
AT5G06150.1	Bra020500.1-P	AT5G25460.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005880.1-P	Field mustard	nucleus, plastid	83.86	84.06
AT5G06150.1	Thale cress	nucleus	85.06	79.33
Bra002046.1-P	Field mustard	nucleus	66.51	70.23
CDY14091	Canola	plastid	93.73	59.3
KRH66720	Soybean	endoplasmic reticulum, vacuole	28.43	59.3
TraesCSU01G217300.1	Wheat	cytosol	29.16	56.02
CDY04980	Canola	nucleus	96.39	55.71
VIT_08s0040g00930.t01	Wine grape	nucleus	58.55	53.64
KRG95055	Soybean	nucleus	58.55	53.41
KRH66715	Soybean	nucleus	50.36	53.32
KRH66713	Soybean	nucleus	57.83	52.86
Zm00001d019469_P001	Maize	extracellular	18.07	52.45
GSMUA_Achr4P10090_001	Banana	nucleus	53.49	52.24
Bra011769.1-P	Field mustard	nucleus	53.73	52.1
VIT_13s0067g01420.t01	Wine grape	nucleus	56.39	50.65
Solyc10g078330.1.1	Tomato	nucleus	51.08	50.12
KRH66718	Soybean	plastid	44.58	49.6
PGSC0003DMT400018480	Potato	nucleus	50.6	49.41
GSMUA_Achr7P21380_001	Banana	nucleus	53.98	49.02
EES03772	Sorghum	nucleus, plastid	52.77	48.78
Solyc10g080950.1.1	Tomato	nucleus	54.22	48.7
GSMUA_Achr10P...	Banana	nucleus	53.01	48.57
GSMUA_Achr8P23970_001	Banana	nucleus	50.84	48.51
PGSC0003DMT400072211	Potato	nucleus	53.98	48.28
HORVU0Hr1G001680.1	Barley	nucleus	37.11	48.12
GSMUA_AchrUn_...	Banana	nucleus	34.46	47.99
AT1G34460.5	Thale cress	cytosol	57.35	47.79
Zm00001d012560_P002	Maize	nucleus, plastid	51.08	47.22
KXG24389	Sorghum	nucleus	28.43	46.83
GSMUA_Achr3P24980_001	Banana	nucleus	45.3	46.77
TraesCS1D01G309300.1	Wheat	nucleus, plastid	48.67	46.33
HORVU3Hr1G078880.2	Barley	nucleus	50.36	46.14
KRG95056	Soybean	cytosol	42.89	45.99
TraesCS3B01G363200.3	Wheat	nucleus	50.84	45.77
TraesCS1B01G320900.1	Wheat	nucleus, plastid	47.95	45.64
HORVU1Hr1G068080.1	Barley	plastid	37.59	45.61
TraesCS3D01G326600.1	Wheat	nucleus	49.88	45.49
TraesCS1A01G309800.1	Wheat	nucleus	47.71	45.41
TraesCS3A01G333000.2	Wheat	nucleus	50.12	45.22
HORVU1Hr1G068010.7	Barley	mitochondrion, nucleus	45.54	45.0
TraesCS1D01G309400.1	Wheat	nucleus	47.23	44.85
HORVU1Hr1G068160.2	Barley	nucleus, plastid	47.23	44.24
HORVU0Hr1G026010.1	Barley	nucleus, plastid	47.23	44.24
Zm00001d043164_P002	Maize	nucleus	51.33	44.01
HORVU0Hr1G001690.16	Barley	nucleus, peroxisome	46.27	43.84
TraesCS1B01G321000.1	Wheat	nucleus	46.02	43.81
Zm00001d010656_P001	Maize	nucleus	46.27	43.05
Os01t0281200-01	Rice	nucleus	42.89	42.08
EES18429	Sorghum	mitochondrion	46.02	41.52
TraesCS3A01G192100.1	Wheat	nucleus, plastid	41.2	41.3
TraesCS3D01G195200.1	Wheat	plastid	40.96	41.16
TraesCS7A01G229300.1	Wheat	endoplasmic reticulum	31.33	39.51
Os05t0493500-00	Rice	nucleus	45.06	38.4
Bra024504.1-P	Field mustard	nucleus	38.55	38.19
EES02793	Sorghum	nucleus	40.96	36.72
Bra037265.1-P	Field mustard	nucleus	36.14	36.67
Zm00001d008221_P001	Maize	nucleus	41.93	36.33
Bra017726.1-P	Field mustard	nucleus	35.42	36.21
Bra016460.1-P	Field mustard	nucleus	35.42	35.85
Bra003727.1-P	Field mustard	nucleus	33.01	35.77
Os02t0627800-00	Rice	cytosol, mitochondrion, peroxisome	33.49	35.1
Bra015762.1-P	Field mustard	nucleus	36.39	35.03
Bra025831.1-P	Field mustard	nucleus	34.22	34.63
HORVU3Hr1G040990.2	Barley	nucleus, plastid	40.24	33.94
Bra032220.1-P	Field mustard	nucleus	28.43	33.05
Bra033658.1-P	Field mustard	nucleus	28.19	32.87
Bra040753.1-P	Field mustard	nucleus, plastid	28.67	32.78
Bra040793.1-P	Field mustard	nucleus	28.19	32.23
Zm00001d020033_P001	Maize	nucleus	41.2	31.43
Bra040792.1-P	Field mustard	nucleus, plastid	27.23	31.04
Zm00001d020996_P001	Maize	nucleus	40.24	30.7
Bra040710.1-P	Field mustard	nucleus	27.23	30.46
Bra015671.1-P	Field mustard	plastid	26.75	28.76
Bra000822.1-P	Field mustard	nucleus	25.78	28.38
Bra022173.1-P	Field mustard	nucleus, plastid	25.3	27.85
Bra031463.1-P	Field mustard	nucleus	24.58	27.64
Bra023606.1-P	Field mustard	plastid	27.71	27.45
Bra026756.1-P	Field mustard	plastid	26.75	27.14
Bra026065.1-P	Field mustard	nucleus	33.01	27.08
Bra032202.1-P	Field mustard	plastid	26.75	26.3
Bra003563.1-P	Field mustard	plastid	26.27	25.23
Bra016654.1-P	Field mustard	nucleus, plastid	26.51	24.72
Bra026120.1-P	Field mustard	nucleus	27.47	24.46
Bra008973.1-P	Field mustard	nucleus, plastid	25.3	24.03
Bra035186.1-P	Field mustard	plastid	26.75	24.03
Bra008477.1-P	Field mustard	plastid	26.27	23.85
Bra016640.1-P	Field mustard	nucleus	33.73	21.37
Bra036544.1-P	Field mustard	nucleus	27.47	11.55

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EnsemblPlantsGene:Bra028741	EnsemblPlants:Bra028741.1	EnsemblPlants:Bra028741.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4EIX6	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF267	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002543178
SEG:seg	:	:	:	:	:

Description

AT5G06150 (E=1e-161) CYC1BAT, CYCB1;2 | CYC1BAT; cyclin-dependent protein kinase regulator

Coordinates

chrA02:-:2286747..2288419

Molecular Weight (calculated)

46146.1 Da

IEP (calculated)

9.627

GRAVY (calculated)

-0.205

Length

415 amino acids

Sequence
(BLAST)

001: MATRTNMPEQ VRGVPVAADG AKIQNKNGAV KNRRALGDIG NRNLVSVPLA QGGKPINRPI TRSFRAQLLA NANGGENKAP VLAAKKPQQP LVPKKNLVVK
101: KAAVSSPPKS KNVTYSSVLS ARSKAACGVA NKPKILDIDE SDKDNHLAAV EYVEDMYSFY KEVEKESQPK MYMHIQTEMN EKMRAILVDW LLEVHVKFEL
201: NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYN NKQILVMEKT ILGNLEWYLT VPTQYVFLVR FIKASVSDPE
301: MENMVHFLAE LGMMHYDTLK FCPSMLAASA VYTARCSLNK SPAWTDTLKF HTGYSESEIM ECSKLLALHH SRCGESKLRA VYKKYSKIEN GGVALVSPAK
401: SLLSSAADVK EPLSA

Best Arabidopsis Sequence Match ( AT5G06150.1 )
(BLAST)

001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS

Arabidopsis Description

CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.