Factsheet for Bra015762.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87612	Canola	nucleus	99.54	99.54
Bra003727.1-P	Field mustard	nucleus	80.05	90.08
AT1G76310.3	Thale cress	nucleus	84.92	79.74
Bra016460.1-P	Field mustard	nucleus	71.23	74.88
Bra025831.1-P	Field mustard	nucleus	67.98	71.46
PGSC0003DMT400075380	Potato	nucleus	37.59	68.35
VIT_18s0001g14170.t01	Wine grape	nucleus	67.29	65.76
Solyc04g082430.2.1	Tomato	nucleus	59.4	65.14
PGSC0003DMT400025854	Potato	nucleus	65.66	64.17
GSMUA_Achr5P19270_001	Banana	cytosol	30.39	60.37
KRH60628	Soybean	nucleus	55.92	59.51
KRH51329	Soybean	nucleus, plastid	57.08	59.28
Solyc12g094600.1.1	Tomato	nucleus	58.24	59.06
KXG20945	Sorghum	nucleus	56.61	57.55
Zm00001d036360_P002	Maize	nucleus	56.38	57.31
Os06t0726800-01	Rice	nucleus	55.68	57.28
Bra017726.1-P	Field mustard	nucleus	51.74	54.93
GSMUA_Achr11P...	Banana	nucleus	51.97	54.9
GSMUA_Achr8P13320_001	Banana	nucleus	53.36	54.76
TraesCS7D01G536000.1	Wheat	nucleus	53.13	54.65
TraesCS7B01G472800.1	Wheat	nucleus	53.13	54.65
Bra024504.1-P	Field mustard	nucleus	53.13	54.65
GSMUA_Achr5P19110_001	Banana	nucleus	53.6	54.48
Bra037265.1-P	Field mustard	nucleus	51.51	54.28
TraesCS7A01G549500.1	Wheat	nucleus	52.67	54.18
HORVU7Hr1G121820.6	Barley	nucleus	52.67	54.05
Os04t0563700-01	Rice	mitochondrion	51.51	52.86
TraesCS2A01G404800.1	Wheat	nucleus	48.72	51.85
TraesCS2B01G422800.1	Wheat	nucleus	48.96	51.59
TraesCS2D01G401700.1	Wheat	nucleus, plastid	49.42	50.59
EES12664	Sorghum	nucleus	49.65	49.54
Zm00001d026129_P001	Maize	nucleus	48.72	49.3
HORVU0Hr1G022770.1	Barley	nucleus, plastid	31.55	48.92
Zm00001d002662_P010	Maize	nucleus	49.65	47.03
HORVU2Hr1G096070.2	Barley	nucleus	48.96	44.8
Bra002046.1-P	Field mustard	nucleus	34.11	37.4
Bra028741.1-P	Field mustard	nucleus	35.03	36.39
Bra005880.1-P	Field mustard	nucleus, plastid	34.8	36.23
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	56.15	36.23
Bra011769.1-P	Field mustard	nucleus	31.79	32.01
Bra040793.1-P	Field mustard	nucleus	26.22	31.13
Bra040753.1-P	Field mustard	nucleus, plastid	25.99	30.85
Bra031463.1-P	Field mustard	nucleus	26.22	30.62
Bra015671.1-P	Field mustard	plastid	27.38	30.57
Bra000822.1-P	Field mustard	nucleus	26.68	30.5
Bra032220.1-P	Field mustard	nucleus	24.83	29.97
Bra023606.1-P	Field mustard	plastid	29.0	29.83
Bra033658.1-P	Field mustard	nucleus	24.36	29.49
Bra026756.1-P	Field mustard	plastid	27.15	28.61
Bra040710.1-P	Field mustard	nucleus	24.59	28.57
Bra032202.1-P	Field mustard	plastid	27.84	28.44
Bra040792.1-P	Field mustard	nucleus, plastid	23.2	27.47
Bra008973.1-P	Field mustard	nucleus, plastid	27.61	27.23
Bra003563.1-P	Field mustard	plastid	27.15	27.08
Bra022173.1-P	Field mustard	nucleus, plastid	23.67	27.06
Bra016654.1-P	Field mustard	nucleus, plastid	27.84	26.97
Bra026065.1-P	Field mustard	nucleus	31.32	26.68
Bra008477.1-P	Field mustard	plastid	27.61	26.04
Bra026120.1-P	Field mustard	nucleus	27.38	25.32
Bra035186.1-P	Field mustard	plastid	26.22	24.46
Bra016640.1-P	Field mustard	nucleus	32.48	21.37
Bra036544.1-P	Field mustard	nucleus	26.68	11.65

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EnsemblPlantsGene:Bra015762	EnsemblPlants:Bra015762.1	EnsemblPlants:Bra015762.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4DGY5	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF350	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI000254206A
SEG:seg	:	:	:	:	:

Description

AT1G76310 (E=3e-192) CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator

Coordinates

chrA07:-:20980015..20982064

Molecular Weight (calculated)

49143.9 Da

IEP (calculated)

4.760

GRAVY (calculated)

-0.414

Length

431 amino acids

Sequence
(BLAST)

001: MGGSDENRHG VIGPMNPQGG VRGGKANPGN GQTRRALSNI NKNIIGAPVY PCAVNKRPLS EKNVMCHKKI LPPPVPAHRP ITRKFAAQLA ENNPQTKKEE
101: TKSEPVDIVI IDVEEEEEDG DFNEPMFVQH TEAMLDEIDR MEGIEMEDSN DTDEEEEEAV MDIDSCDKKN PLAVVDYIDD IYDFYKKNEC RSCVPPNYME
201: NQPDINERMR GILVDWLIEV HYKFELMEET LYLTINLIDR FLAVHHHVAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRRE VLDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDQKVEL LSFFIVELCL VEYEMLQYAP SQLAASAIYT AQSTLKGFEE WSKTCEFYTG YTEEKLMECS RKMAGLHHEA
401: GTGKLTGVYR KYNTSKFGYA SRTEPAGFLL L

Best Arabidopsis Sequence Match ( AT1G76310.1 )
(BLAST)

001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L

Arabidopsis Description

CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.