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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 4
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85466 Canola plastid 97.14 96.45
CDY02719 Canola plastid 95.23 93.01
Bra032202.1-P Field mustard plastid 78.28 77.73
AT1G44110.1 Thale cress plastid 77.09 70.22
Os05t0237100-01 Rice extracellular 29.36 62.44
Bra015671.1-P Field mustard plastid 49.88 54.15
KRH64625 Soybean plastid 62.29 53.93
KRH53279 Soybean plastid 61.1 53.33
TraesCS1B01G151800.3 Wheat nucleus 44.63 52.68
VIT_18s0001g02060.t01 Wine grape plastid 60.62 51.31
Solyc11g005090.1.1 Tomato plastid 58.23 49.8
PGSC0003DMT400015424 Potato plastid 55.85 49.58
KRH17986 Soybean plastid 58.71 48.91
KRH16410 Soybean plastid 58.47 48.61
Bra022173.1-P Field mustard nucleus, plastid 43.44 48.28
Os12t0298950-00 Rice nucleus 50.36 47.2
Os01t0233100-00 Rice nucleus, plastid 53.46 45.62
GSMUA_Achr5P06960_001 Banana nucleus, plastid 54.42 45.6
Zm00001d032128_P001 Maize cytosol 17.18 45.57
Os01t0233500-01 Rice nucleus, plastid 54.89 45.28
TraesCS3B01G183400.1 Wheat plastid 54.89 45.1
GSMUA_Achr2P19220_001 Banana nucleus, plastid 53.94 45.02
TraesCS3D01G164600.1 Wheat plastid 54.65 44.9
TraesCS3A01G157000.1 Wheat plastid 54.18 44.25
TraesCS1D01G134100.2 Wheat nucleus, plastid 50.12 44.03
Bra000822.1-P Field mustard nucleus 39.38 43.77
Zm00001d040381_P001 Maize plastid 55.61 43.71
Bra031463.1-P Field mustard nucleus 38.19 43.36
Bra033658.1-P Field mustard nucleus 35.32 41.57
KXG21616 Sorghum nucleus, plastid 47.02 41.13
Bra032220.1-P Field mustard nucleus 34.61 40.62
Bra026756.1-P Field mustard plastid 39.62 40.59
Bra040753.1-P Field mustard nucleus, plastid 35.08 40.5
Bra040792.1-P Field mustard nucleus, plastid 35.08 40.38
Bra040793.1-P Field mustard nucleus 34.61 39.94
Bra040710.1-P Field mustard nucleus 35.08 39.62
Zm00001d009011_P001 Maize nucleus, plastid 47.73 39.22
Zm00001d021353_P002 Maize mitochondrion, nucleus 18.62 39.0
Bra003563.1-P Field mustard plastid 38.9 37.73
TraesCS1A01G138300.1 Wheat nucleus, plastid 47.26 37.71
Bra008973.1-P Field mustard nucleus, plastid 38.66 37.07
Bra016654.1-P Field mustard nucleus, plastid 39.14 36.85
Bra008477.1-P Field mustard plastid 40.1 36.76
Bra035186.1-P Field mustard plastid 39.14 35.5
Bra026120.1-P Field mustard nucleus 39.14 35.19
Zm00001d010404_P001 Maize nucleus 37.23 32.16
Bra003727.1-P Field mustard nucleus 27.45 30.03
Bra002046.1-P Field mustard nucleus 28.16 30.03
Bra017726.1-P Field mustard nucleus 28.88 29.8
Bra016460.1-P Field mustard nucleus 29.12 29.76
Bra025831.1-P Field mustard nucleus 28.88 29.51
Bra024504.1-P Field mustard nucleus 29.12 29.12
Bra015762.1-P Field mustard nucleus 29.83 29.0
Bra005880.1-P Field mustard nucleus, plastid 28.16 28.5
Bra037265.1-P Field mustard nucleus 27.68 28.36
Bra028741.1-P Field mustard nucleus 27.45 27.71
Bra011769.1-P Field mustard nucleus 26.97 26.4
Bra026065.1-P Field mustard nucleus 24.11 19.96
Bra036544.1-P Field mustard nucleus 37.95 16.11
Bra016640.1-P Field mustard nucleus 23.87 15.27
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.1EnsemblPlantsGene:Bra023606EnsemblPlants:Bra023606.1EnsemblPlants:Bra023606.1-PInterPro:Cyclin-like
InterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_NGO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634UniProt:M4E4A3PFAM:PF00134PFAM:PF02984PIRSF:PIRSF001771ScanProsite:PS00292
PANTHER:PTHR10177PANTHER:PTHR10177:SF239SMART:SM00385SMART:SM01332SUPFAM:SSF47954UniParc:UPI00025430C1
Description
AT1G44110 (E=5e-147) CYCA1;1 | CYCA1;1 (Cyclin A1;1); cyclin-dependent protein kinase regulator
Coordinates
chrA02:+:4164013..4165895
Molecular Weight (calculated)
47223.7 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.325
Length
419 amino acids
Sequence
(BLAST)
001: MSKTTNQNRR PSFTSSTESS MRKRHGPPPS SSSAVKPISN TAVMVAKKRA PLGNITNQKK DSRIFPNSSS ADSAHCPNKS AKLKLAAPTQ PVCVNACETK
101: STCEEEVVPI ERKAFSNLCI TPIMSETENK EDKFMNIDNK DDADPQLCAT FACDIYNHLR AAEAKKQPAV DYMATVQKDV NSTMRGILVD WLVEVSEEYR
201: LVPETLYLTV NYIDRYLSGN VISRQKLQLL GVACMMIAAK YEEVCAPQVE EFCYITDNTY LKDEVLDMES AVLNYLKFEM SAPTVKCFLR RFSRAAQGVH
301: EAPCMQLECM ASYIAELSLL EYTMLSHSPS LVAASAIFLA KYTLDPTRRP WNSTLRHYTQ YEAMELRGCV MDLQRLCSNA HVSTLPAVRD KYSQHKYKFV
401: AKKFCPSIIP PDFFKNSLY
Best Arabidopsis Sequence Match ( AT1G44110.1 )
(BLAST)
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.