Factsheet for Bra003727.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68105	Canola	nucleus	95.04	92.15
Bra015762.1-P	Field mustard	nucleus	90.08	80.05
AT1G76310.3	Thale cress	nucleus	85.64	71.46
PGSC0003DMT400075380	Potato	nucleus	43.08	69.62
Bra016460.1-P	Field mustard	nucleus	72.85	68.05
Bra025831.1-P	Field mustard	nucleus	69.45	64.88
VIT_18s0001g14170.t01	Wine grape	nucleus	67.89	58.96
Solyc04g082430.2.1	Tomato	nucleus	59.79	58.27
PGSC0003DMT400025854	Potato	nucleus	64.75	56.24
Solyc12g094600.1.1	Tomato	nucleus	60.57	54.59
KRH60628	Soybean	nucleus	56.92	53.83
KRH51329	Soybean	nucleus, plastid	57.7	53.25
GSMUA_Achr5P19270_001	Banana	cytosol	29.5	52.07
Os06t0726800-01	Rice	nucleus	56.66	51.79
Bra017726.1-P	Field mustard	nucleus	54.57	51.48
Zm00001d036360_P002	Maize	nucleus	56.92	51.42
KXG20945	Sorghum	nucleus	56.66	51.18
Bra024504.1-P	Field mustard	nucleus	55.87	51.07
GSMUA_Achr11P...	Banana	nucleus	54.31	50.98
GSMUA_Achr8P13320_001	Banana	nucleus	55.61	50.71
Bra037265.1-P	Field mustard	nucleus	53.79	50.37
GSMUA_Achr5P19110_001	Banana	nucleus	55.61	50.24
HORVU0Hr1G022770.1	Barley	nucleus, plastid	36.03	49.64
Os04t0563700-01	Rice	mitochondrion	54.05	49.29
TraesCS7B01G472800.1	Wheat	nucleus	53.79	49.16
TraesCS7D01G536000.1	Wheat	nucleus	53.79	49.16
HORVU7Hr1G121820.6	Barley	nucleus	53.52	48.81
TraesCS7A01G549500.1	Wheat	nucleus	53.0	48.45
TraesCS2A01G404800.1	Wheat	nucleus	50.65	47.9
TraesCS2B01G422800.1	Wheat	nucleus	50.65	47.43
EES12664	Sorghum	nucleus	52.48	46.53
TraesCS2D01G401700.1	Wheat	nucleus, plastid	50.91	46.32
Zm00001d026129_P001	Maize	nucleus	51.17	46.01
Zm00001d002662_P010	Maize	nucleus	51.44	43.3
HORVU2Hr1G096070.2	Barley	nucleus	50.13	40.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	59.01	33.83
Bra002046.1-P	Field mustard	nucleus	34.46	33.59
Bra028741.1-P	Field mustard	nucleus	35.77	33.01
Bra005880.1-P	Field mustard	nucleus, plastid	35.25	32.61
Bra040793.1-P	Field mustard	nucleus	27.15	28.65
Bra040753.1-P	Field mustard	nucleus, plastid	26.89	28.37
Bra033658.1-P	Field mustard	nucleus	26.11	28.09
Bra032220.1-P	Field mustard	nucleus	26.11	28.01
Bra000822.1-P	Field mustard	nucleus	27.42	27.85
Bra011769.1-P	Field mustard	nucleus	30.81	27.57
Bra015671.1-P	Field mustard	plastid	27.68	27.46
Bra023606.1-P	Field mustard	plastid	30.03	27.45
Bra031463.1-P	Field mustard	nucleus	26.37	27.37
Bra032202.1-P	Field mustard	plastid	29.77	27.01
Bra040710.1-P	Field mustard	nucleus	25.59	26.42
Bra040792.1-P	Field mustard	nucleus, plastid	25.07	26.37
Bra026756.1-P	Field mustard	plastid	27.15	25.43
Bra022173.1-P	Field mustard	nucleus, plastid	24.8	25.2
Bra003563.1-P	Field mustard	plastid	28.2	25.0
Bra008973.1-P	Field mustard	nucleus, plastid	28.2	24.71
Bra026065.1-P	Field mustard	nucleus	32.38	24.51
Bra008477.1-P	Field mustard	plastid	28.98	24.29
Bra016654.1-P	Field mustard	nucleus, plastid	28.2	24.27
Bra026120.1-P	Field mustard	nucleus	27.68	22.75
Bra035186.1-P	Field mustard	plastid	27.42	22.73
Bra016640.1-P	Field mustard	nucleus	33.68	19.69
Bra036544.1-P	Field mustard	nucleus	27.68	10.74

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EnsemblPlantsGene:Bra003727	EnsemblPlants:Bra003727.1	EnsemblPlants:Bra003727.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4CHP4	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF350	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002541563
SEG:seg	:	:	:	:	:

Description

AT1G76310 (E=4e-127) CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator

Coordinates

chrA07:+:14727516..14729499

Molecular Weight (calculated)

44034.2 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.368

Length

383 amino acids

Sequence
(BLAST)

001: MVGSDENKHG VVGPMNPRNG QTRRALSNIN KNIIRAPLYP CAVNKRPLSQ KNGVCHKKIP PVPVHRPITR KFAAQLAENK PQIHKQQETK QSDSIDRIIT
101: DVEEEDGDFH EPMFVQHTES ILDEIDTMEG IEMEEEEEEE TCRSCVPPSY MENQPDINER MRGILVDWLI EVHYKFELME ETLYLTINLI DRFLAVTQHV
201: PRKKLQLVGV TAMLLACKYE EVSVPVVDDL IVISDKAYTR REVLDMEKLM ANTLQFNFCL PTPYVFMRRF LKAAQSDKKV ELLSFFIIEL CLVEYEMLQY
301: APSQLAASAI YTAQSTLKGF EEWSKTCEFY TGYTEEKLME CSRKMVGLHH KAGTGKLTGV YRKYNTSKFG YAARTEPAGF LLL

Best Arabidopsis Sequence Match ( AT1G76310.1 )
(BLAST)

001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L

Arabidopsis Description

CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.