Factsheet for Bra022173.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 4
nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92090	Canola	mitochondrion, nucleus	87.27	92.16
Bra015671.1-P	Field mustard	plastid	69.23	67.62
AT1G77390.1	Thale cress	plastid	62.33	53.17
Os05t0237100-01	Rice	extracellular	24.93	47.72
Bra023606.1-P	Field mustard	plastid	48.28	43.44
Bra032202.1-P	Field mustard	plastid	46.95	41.94
Zm00001d032128_P001	Maize	cytosol	16.98	40.51
TraesCS1B01G151800.3	Wheat	nucleus	37.14	39.44
Bra033658.1-P	Field mustard	nucleus	36.34	38.48
KRH53279	Soybean	plastid	48.54	38.12
KRH64625	Soybean	plastid	48.81	38.02
VIT_18s0001g02060.t01	Wine grape	plastid	49.34	37.58
Bra032220.1-P	Field mustard	nucleus	34.48	36.41
Solyc11g005090.1.1	Tomato	plastid	47.21	36.33
Os12t0298950-00	Rice	nucleus	42.97	36.24
PGSC0003DMT400015424	Potato	plastid	45.36	36.23
KRH16410	Soybean	plastid	48.28	36.11
Bra040793.1-P	Field mustard	nucleus	34.48	35.81
Bra040792.1-P	Field mustard	nucleus, plastid	34.48	35.71
KRH17986	Soybean	plastid	47.21	35.39
Bra040710.1-P	Field mustard	nucleus	34.75	35.31
Bra000822.1-P	Field mustard	nucleus	35.01	35.01
Bra040753.1-P	Field mustard	nucleus, plastid	33.69	34.99
Bra031463.1-P	Field mustard	nucleus	34.22	34.96
Bra026756.1-P	Field mustard	plastid	37.4	34.47
KXG21616	Sorghum	nucleus, plastid	43.24	34.03
Os01t0233500-01	Rice	nucleus, plastid	45.62	33.86
Os01t0233100-00	Rice	nucleus, plastid	44.03	33.81
TraesCS3B01G183400.1	Wheat	plastid	45.36	33.53
TraesCS3D01G164600.1	Wheat	plastid	45.09	33.33
GSMUA_Achr2P19220_001	Banana	nucleus, plastid	44.3	33.27
TraesCS3A01G157000.1	Wheat	plastid	45.09	33.14
TraesCS1D01G134100.2	Wheat	nucleus, plastid	41.91	33.12
GSMUA_Achr5P06960_001	Banana	nucleus, plastid	43.5	32.8
Zm00001d040381_P001	Maize	plastid	46.15	32.65
Zm00001d021353_P002	Maize	mitochondrion, nucleus	16.98	32.0
Bra016654.1-P	Field mustard	nucleus, plastid	36.6	31.01
Bra008973.1-P	Field mustard	nucleus, plastid	35.54	30.66
Zm00001d009011_P001	Maize	nucleus, plastid	41.38	30.59
Bra003563.1-P	Field mustard	plastid	34.75	30.32
Bra008477.1-P	Field mustard	plastid	35.81	29.54
TraesCS1A01G138300.1	Wheat	nucleus, plastid	40.85	29.33
Bra026120.1-P	Field mustard	nucleus	35.28	28.54
Bra035186.1-P	Field mustard	plastid	34.48	28.14
Zm00001d010404_P001	Maize	nucleus	35.28	27.42
Bra002046.1-P	Field mustard	nucleus	28.12	26.97
Bra017726.1-P	Field mustard	nucleus	28.91	26.85
Bra011769.1-P	Field mustard	nucleus	29.97	26.4
Bra005880.1-P	Field mustard	nucleus, plastid	27.85	25.36
Bra028741.1-P	Field mustard	nucleus	27.85	25.3
Bra003727.1-P	Field mustard	nucleus	25.2	24.8
Bra016460.1-P	Field mustard	nucleus	26.79	24.63
Bra037265.1-P	Field mustard	nucleus	26.53	24.45
Bra025831.1-P	Field mustard	nucleus	26.53	24.39
Bra024504.1-P	Field mustard	nucleus	26.79	24.11
Bra015762.1-P	Field mustard	nucleus	27.06	23.67
Bra026065.1-P	Field mustard	nucleus	24.4	18.18
Bra016640.1-P	Field mustard	nucleus	24.67	14.2
Bra036544.1-P	Field mustard	nucleus	36.07	13.78

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.1	EnsemblPlantsGene:Bra022173	EnsemblPlants:Bra022173.1	EnsemblPlants:Bra022173.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4E076	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF239	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002547730
SEG:seg	:	:	:	:	:

Description

AT1G77390 (E=4e-096) CYCA1;2, CYCA1 | CYCA1;2 (CYCLIN A1;2); cyclin-dependent protein kinase regulator

Coordinates

chrA05:+:19308121..19309254

Molecular Weight (calculated)

42653.0 Da

IEP (calculated)

7.964

GRAVY (calculated)

-0.277

Length

377 amino acids

Sequence
(BLAST)

001: MSSTAKRTSS SSSLSSWGNH QSKDNPLCYG DITNQRSGSP PRKLGLGFTL ICKFVQPLKF HYCSKKTNQT KPLELLNPSD LGKEDDDDSS NLGEDPQLCG
101: AFTCDIYEHN LRSSEAKKRP AIDYMERVQP NIDATMRAIL IDWLVEVAEE FSLPPETLYL AVNCLDRYLS GNVITKLNLQ LLGVSCIMIS AKYYGRGSVR
201: APLRQVESFC YITDYTYSRN ELLEMESCVL NYLKFELTTP TANCFLSHFV PQGKREEVPS SHLLFESLAS YLCELSLLDY AMLRYAPSLV AASAVFLARY
301: VLHPSRKPSW SSTLEHYTRY RAQHLEACVK NLLRLCHESP SGDNVVAVRK KYSKAKYKFA ANMFYPSSLP VPQELFL

Best Arabidopsis Sequence Match ( AT1G77390.1 )
(BLAST)

001: MSSSSRNLSQ ENPIPRPNLA KTRTSLRDVG NRRAPLGDIT NQKNGSRNPS PSSTLVNCSN KIGQSKKAPK PALSRNWNLG ILDSGLPPKP NAKSNIIVPY
101: EDTELLQSDD SLLCSSPALS LDASPTQSDP SISTHDSLTN HVVDYMVEST TDDGNDDDDD EIVNIDSDLM DPQLCASFAC DIYEHLRVSE VNKRPALDYM
201: ERTQSSINAS MRSILIDWLV EVAEEYRLSP ETLYLAVNYV DRYLTGNAIN KQNLQLLGVT CMMIAAKYEE VCVPQVEDFC YITDNTYLRN ELLEMESSVL
301: NYLKFELTTP TAKCFLRRFL RAAQGRKEVP SLLSECLACY LTELSLLDYA MLRYAPSLVA ASAVFLAQYT LHPSRKPWNA TLEHYTSYRA KHMEACVKNL
401: LQLCNEKLSS DVVAIRKKYS QHKYKFAAKK LCPTSLPQEL FL

Arabidopsis Description

CYCA1-2TAM [Source:UniProtKB/TrEMBL;Acc:A0A178WDV8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.