Factsheet for Bra037265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015735.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17620.1	Bra015735.1-P	AT1G76540.1	12857813

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30357	Canola	nucleus	99.51	99.51
Bra024504.1-P	Field mustard	nucleus	83.37	81.38
AT2G17620.1	Thale cress	nucleus	83.86	79.95
Bra017726.1-P	Field mustard	nucleus	73.11	73.65
KRH28901	Soybean	nucleus	61.37	57.97
KRH76553	Soybean	nucleus	61.12	57.87
GSMUA_Achr5P19270_001	Banana	cytosol	29.1	54.84
PGSC0003DMT400093973	Potato	nucleus	43.77	54.24
Solyc02g061650.1.1	Tomato	nucleus	46.21	53.85
Bra003727.1-P	Field mustard	nucleus	50.37	53.79
Bra016460.1-P	Field mustard	nucleus	52.57	52.44
Bra015762.1-P	Field mustard	nucleus	54.28	51.51
Bra025831.1-P	Field mustard	nucleus	51.34	51.22
GSMUA_Achr11P...	Banana	nucleus	49.88	50.0
Os06t0726800-01	Rice	nucleus	50.86	49.64
KXG20945	Sorghum	nucleus	51.34	49.53
GSMUA_Achr8P13320_001	Banana	nucleus	50.61	49.29
Zm00001d036360_P002	Maize	nucleus	50.86	49.06
HORVU0Hr1G022770.1	Barley	nucleus, plastid	33.01	48.56
TraesCS7B01G472800.1	Wheat	nucleus	49.14	47.97
GSMUA_Achr5P19110_001	Banana	nucleus	49.63	47.88
HORVU7Hr1G121820.6	Barley	nucleus	49.14	47.86
Os04t0563700-01	Rice	mitochondrion	48.9	47.62
TraesCS7D01G536000.1	Wheat	nucleus	48.66	47.49
TraesCS2B01G422800.1	Wheat	nucleus	47.43	47.43
TraesCS2A01G404800.1	Wheat	nucleus	46.7	47.16
TraesCS7A01G549500.1	Wheat	nucleus	48.17	47.02
Zm00001d026129_P001	Maize	nucleus	48.41	46.48
TraesCS2D01G401700.1	Wheat	nucleus, plastid	47.43	46.08
EES12664	Sorghum	nucleus	48.66	46.06
Zm00001d002662_P010	Maize	nucleus	47.43	42.64
HORVU2Hr1G096070.2	Barley	nucleus	46.21	40.13
Bra002046.1-P	Field mustard	nucleus	35.7	37.15
Bra028741.1-P	Field mustard	nucleus	36.67	36.14
Bra005880.1-P	Field mustard	nucleus, plastid	35.7	35.27
Bra011769.1-P	Field mustard	nucleus	34.72	33.18
Bra040793.1-P	Field mustard	nucleus	28.36	31.96
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	52.08	31.89
Bra032220.1-P	Field mustard	nucleus	27.63	31.65
Bra040753.1-P	Field mustard	nucleus, plastid	27.63	31.13
Bra033658.1-P	Field mustard	nucleus	26.89	30.9
Bra040792.1-P	Field mustard	nucleus, plastid	27.14	30.49
Bra040710.1-P	Field mustard	nucleus	27.63	30.46
Bra015671.1-P	Field mustard	plastid	27.63	29.27
Bra000822.1-P	Field mustard	nucleus	26.89	29.18
Bra026756.1-P	Field mustard	plastid	29.1	29.1
Bra031463.1-P	Field mustard	nucleus	26.16	29.0
Bra023606.1-P	Field mustard	plastid	28.36	27.68
Bra008973.1-P	Field mustard	nucleus, plastid	29.1	27.23
Bra003563.1-P	Field mustard	plastid	28.12	26.62
Bra022173.1-P	Field mustard	nucleus, plastid	24.45	26.53
Bra016654.1-P	Field mustard	nucleus, plastid	28.61	26.29
Bra026065.1-P	Field mustard	nucleus	32.52	26.28
Bra032202.1-P	Field mustard	plastid	26.89	26.07
Bra026120.1-P	Field mustard	nucleus	28.61	25.11
Bra008477.1-P	Field mustard	plastid	27.63	24.73
Bra035186.1-P	Field mustard	plastid	26.65	23.59
Bra016640.1-P	Field mustard	nucleus	34.72	21.68
Bra036544.1-P	Field mustard	nucleus	26.89	11.14

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EnsemblPlantsGene:Bra037265	EnsemblPlants:Bra037265.1	EnsemblPlants:Bra037265.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4F854	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF336	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002541E02
SEG:seg	:	:	:	:	:

Description

AT2G17620 (E=8e-144) CYCB2;1 | CYCB2;1 (Cyclin B2;1); cyclin-dependent protein kinase regulator

Coordinates

chrA09:+:4662110..4664033

Molecular Weight (calculated)

46921.5 Da

IEP (calculated)

4.722

GRAVY (calculated)

-0.236

Length

409 amino acids

Sequence
(BLAST)

001: MVNSCENNIV VEATTTSVLQ DETTSRKFGQ EMKREKRRVL GVINQNVVGA RGVVNKRGNL SKSRVEEPLY HQEDAKKLKT SVPSENYFGD SIFIDDEEEE
101: EEATLDHTMP MSLEKPYTEA DPMEEVEMED VIVEEEPILD IDLSDAKNSL AAVEYVQDLY SFYRTMERFS CVPVDYMMQQ MDLNEKMRAI LIDWLIEVHD
201: KFDLMKETLF LTVNLIDRFL SKKAVMRKKL QLVGLVALLL ACKYEEVSVP VVEDLVLISD KAYTRNDVLD MEKTMLSTLQ FNVSLPTQYP FLKRFLKSAQ
301: ADKKCEMLAS FLIELALVEY EMLQFQPSLL AATAVYTAQC TVGGFRQWSS TCEFHSHYSE DQLIECCRKM VSLHQRAPTG KLTGVYRKYN TSKFGYIAKC
401: EAAHFLVSA

Best Arabidopsis Sequence Match ( AT2G17620.1 )
(BLAST)

001: MVNSCENKIF VKPTSTTILQ DETRSRKFGQ EMKREKRRVL RVINQNLAGA RVYPCVVNKR GSLLSNKQEE EEGCQKKKFD SLRPSVTRSG VEEETNKKLK
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS

Arabidopsis Description

CYCB2-1Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.