Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 6
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 44.16 | 72.3 |
| CDY31481 | Canola | nucleus | 23.35 | 71.89 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 44.91 | 70.75 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 44.31 | 70.48 |
| PGSC0003DMT400075380 | Potato | nucleus | 25.0 | 70.46 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 22.6 | 69.59 |
| Os06t0726800-01 | Rice | nucleus | 38.62 | 61.58 |
| KXG20945 | Sorghum | nucleus | 37.72 | 59.43 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 37.57 | 59.2 |
| Bra003727.1-P | Field mustard | nucleus | 33.83 | 59.01 |
| Os04t0563700-01 | Rice | mitochondrion | 36.98 | 58.81 |
| Solyc04g082430.2.1 | Tomato | nucleus | 34.43 | 58.52 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 38.62 | 58.5 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 36.38 | 57.86 |
| CDX85942 | Canola | nucleus | 35.33 | 57.84 |
| Zm00001d036360_P002 | Maize | nucleus | 36.68 | 57.78 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 36.23 | 57.76 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 36.23 | 57.76 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 36.23 | 57.76 |
| Solyc03g032190.2.1 | Tomato | nucleus | 37.13 | 57.54 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 34.88 | 57.53 |
| KRH76553 | Soybean | nucleus | 37.13 | 57.41 |
| PGSC0003DMT400048062 | Potato | nucleus | 36.98 | 57.31 |
| KRH28901 | Soybean | nucleus | 37.13 | 57.27 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 23.65 | 56.83 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 34.73 | 56.72 |
| CDX68105 | Canola | nucleus | 33.38 | 56.46 |
| Bra015762.1-P | Field mustard | nucleus | 36.23 | 56.15 |
| CDY33634 | Canola | nucleus | 34.28 | 56.13 |
| KRH60628 | Soybean | nucleus | 33.98 | 56.05 |
| CDX88261 | Canola | nucleus | 36.08 | 56.05 |
| CDX87612 | Canola | nucleus | 36.08 | 55.92 |
| Bra016460.1-P | Field mustard | nucleus | 34.28 | 55.85 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 35.18 | 55.82 |
| KRH51329 | Soybean | nucleus, plastid | 34.58 | 55.66 |
| CDX96631 | Canola | nucleus | 34.13 | 55.61 |
| Zm00001d026129_P001 | Maize | nucleus | 35.18 | 55.16 |
| PGSC0003DMT400003868 | Potato | nucleus | 35.63 | 54.97 |
| PGSC0003DMT400025854 | Potato | nucleus | 36.23 | 54.88 |
| EES12664 | Sorghum | nucleus | 35.48 | 54.86 |
| AT1G20610.1 | Thale cress | nucleus | 35.18 | 54.78 |
| Bra025831.1-P | Field mustard | nucleus | 33.53 | 54.63 |
| CDY29520 | Canola | nucleus | 33.38 | 54.39 |
| Solyc02g082820.2.1 | Tomato | nucleus | 35.33 | 54.38 |
| Solyc12g094600.1.1 | Tomato | nucleus | 34.43 | 54.12 |
| PGSC0003DMT400093973 | Potato | nucleus | 26.65 | 53.94 |
| Bra024504.1-P | Field mustard | nucleus | 33.83 | 53.94 |
| CDY29184 | Canola | nucleus | 33.83 | 53.94 |
| CDX72551 | Canola | nucleus | 32.34 | 53.87 |
| CDY07838 | Canola | nucleus | 33.53 | 53.59 |
| Zm00001d002662_P010 | Maize | nucleus | 36.08 | 52.97 |
| AT1G76310.3 | Thale cress | nucleus | 36.38 | 52.94 |
| CDY67210 | Canola | nucleus | 32.04 | 52.71 |
| Bra017726.1-P | Field mustard | nucleus | 32.04 | 52.71 |
| CDY26816 | Canola | nucleus | 32.04 | 52.58 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 20.81 | 52.45 |
| CDY30357 | Canola | nucleus | 31.89 | 52.08 |
| Bra037265.1-P | Field mustard | nucleus | 31.89 | 52.08 |
| AT2G17620.1 | Thale cress | nucleus | 33.38 | 51.98 |
| AT4G35620.1 | Thale cress | nucleus | 32.78 | 51.05 |
| Solyc02g061650.1.1 | Tomato | nucleus | 26.8 | 51.0 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 34.73 | 49.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.41 | 41.28 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 25.3 | 39.76 |
| GSMUA_Achr10P... | Banana | nucleus | 26.2 | 38.63 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 24.7 | 37.93 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 25.75 | 37.64 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 22.6 | 37.56 |
| GSMUA_Achr10P... | Banana | nucleus | 16.02 | 33.75 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 12.13 | 32.79 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 13.92 | 32.52 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 17.22 | 29.41 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 14.82 | 27.5 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 17.96 | 24.0 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 17.96 | 23.9 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 16.77 | 20.66 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | Gene3D:3.20.20.80 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr11G22560_001 | EnsemblPlants:GSMUA_Achr11P22560_001 | EnsemblPlants:GSMUA_Achr11T22560_001 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| UniProt:M0RUI6 | PFAM:PF00134 | PFAM:PF00332 | PFAM:PF02984 | ScanProsite:PS00292 | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF336 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| UniParc:UPI0002950507 | SEG:seg | : | : | : | : |
Description
Cyclin-B2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22560_001]
Coordinates
chr11:-:22826965..22832625
Molecular Weight (calculated)
74508.6 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.213
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFDIWPLLA AVAWLVVPSS ATSASLVGVN YGRVGDNLPP PEAVPRLLAS IGVGRARIYD ADPGVLHAFA NTGVELIVAV TVGNEALHSA FASLGLDRDV
101: AVTTAHSLSV LATPSYPPSA AVFRRELLPY VCPLIAFHAG TRSPFFVNAY PYFAYTQESS GSTPSTTRSW RPVAKPGSWS RCDWWQSRRG RRWCPGRRSG
201: HTSSRCSTRT RSQGRHRRGT TGSSSPTARP STISTSRCRR RTPPPQAEAV MVGSRRRSQT AMTGNRRALR DIKNLVGAPL HPCAVTKRAS TDKSNLGHKN
301: PTFVPRRPRT RKFAATLANK SQADGHHEHI GNERKHDPQI PSLLSSSSLD TCTATDTNEH GLSEELPMPM AEETEEMDIS DPEEVEMENL AVEMIPDIDS
401: CDSKDPLAAV DYVEDIYSFY RQIEVTSCVG PDYMSNQFDI NEKMRAILID WLIEVHYKFE LMDETLFLTI NIIDRFLERQ TVLRKKLQLV GVTAMLLACK
501: YEEVSVPVVE DLILISDRAY TRNEVLAMEK LILKTLQFNM SVPTPYVFMR RFLKAAQSDI QLELLSFFIM ELCLVEYKML KFRPSLLAAA AIYTAQCTLK
601: GFKHWNKTCE LHTAYPEDRL LECSMLMVGF HLKAGTGKLT GVHRKYSTFK YGCAAKSEPA LFLLNAGL
101: AVTTAHSLSV LATPSYPPSA AVFRRELLPY VCPLIAFHAG TRSPFFVNAY PYFAYTQESS GSTPSTTRSW RPVAKPGSWS RCDWWQSRRG RRWCPGRRSG
201: HTSSRCSTRT RSQGRHRRGT TGSSSPTARP STISTSRCRR RTPPPQAEAV MVGSRRRSQT AMTGNRRALR DIKNLVGAPL HPCAVTKRAS TDKSNLGHKN
301: PTFVPRRPRT RKFAATLANK SQADGHHEHI GNERKHDPQI PSLLSSSSLD TCTATDTNEH GLSEELPMPM AEETEEMDIS DPEEVEMENL AVEMIPDIDS
401: CDSKDPLAAV DYVEDIYSFY RQIEVTSCVG PDYMSNQFDI NEKMRAILID WLIEVHYKFE LMDETLFLTI NIIDRFLERQ TVLRKKLQLV GVTAMLLACK
501: YEEVSVPVVE DLILISDRAY TRNEVLAMEK LILKTLQFNM SVPTPYVFMR RFLKAAQSDI QLELLSFFIM ELCLVEYKML KFRPSLLAAA AIYTAQCTLK
601: GFKHWNKTCE LHTAYPEDRL LECSMLMVGF HLKAGTGKLT GVHRKYSTFK YGCAAKSEPA LFLLNAGL
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Arabidopsis Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.