Factsheet for Solyc02g082820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003868	Potato	nucleus	95.62	95.84
Solyc03g032190.2.1	Tomato	nucleus	74.88	75.41
KRH76553	Soybean	nucleus	64.06	64.35
KRH28901	Soybean	nucleus	63.59	63.74
Solyc02g061650.1.1	Tomato	nucleus	50.46	62.39
GSMUA_Achr5P19270_001	Banana	cytosol	30.41	60.83
Solyc04g082430.2.1	Tomato	nucleus	53.0	58.52
GSMUA_Achr11P...	Banana	nucleus	53.23	56.62
GSMUA_Achr8P13320_001	Banana	nucleus	54.15	55.95
GSMUA_Achr5P19110_001	Banana	nucleus	54.38	55.66
Os06t0726800-01	Rice	nucleus	52.77	54.65
Solyc12g094600.1.1	Tomato	nucleus	53.46	54.59
KXG20945	Sorghum	nucleus	52.07	53.3
Zm00001d036360_P002	Maize	nucleus	51.15	52.36
Os04t0563700-01	Rice	mitochondrion	50.46	52.14
HORVU7Hr1G121820.6	Barley	nucleus	50.46	52.14
TraesCS2B01G422800.1	Wheat	nucleus	48.85	51.83
TraesCS2A01G404800.1	Wheat	nucleus	48.16	51.6
TraesCS7B01G472800.1	Wheat	nucleus	49.77	51.55
TraesCS7D01G536000.1	Wheat	nucleus	49.54	51.31
TraesCS7A01G549500.1	Wheat	nucleus	49.54	51.31
HORVU0Hr1G022770.1	Barley	nucleus, plastid	32.49	50.72
TraesCS2D01G401700.1	Wheat	nucleus, plastid	48.85	50.36
Zm00001d026129_P001	Maize	nucleus	48.85	49.77
EES12664	Sorghum	nucleus	48.62	48.84
Zm00001d002662_P010	Maize	nucleus	48.39	46.15
HORVU2Hr1G096070.2	Barley	nucleus	47.93	44.16
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	54.38	35.33
Solyc10g078330.1.1	Tomato	nucleus	34.33	35.22
Solyc01g009040.2.1	Tomato	nucleus	34.79	34.71
Solyc10g080950.1.1	Tomato	nucleus	36.87	34.63
Solyc06g073610.2.1	Tomato	nucleus	34.33	33.86
Solyc04g078310.2.1	Tomato	nucleus	26.27	30.73
Solyc12g088520.1.1	Tomato	nucleus	24.42	29.86
Solyc12g088470.1.1	Tomato	nucleus	24.42	29.44
Solyc12g088530.1.1	Tomato	nucleus	23.96	29.38
Solyc12g088500.1.1	Tomato	nucleus	23.73	29.1
Solyc10g049360.1.1	Tomato	nucleus	23.73	27.25
Solyc03g120440.1.1	Tomato	nucleus, plastid	27.65	26.2
Solyc06g065680.2.1	Tomato	nucleus, plastid	27.65	25.26
Solyc11g005090.1.1	Tomato	plastid	28.11	24.9
Solyc07g066660.2.1	Tomato	nucleus	32.03	18.81

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EMBL:AJ243455	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom
InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	PFAM:PF00134
PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF261	UniProt:Q9XGI1
SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	EnsemblPlantsGene:Solyc02g082820.2	EnsemblPlants:Solyc02g082820.2.1	UniParc:UPI000009D469
SEG:seg	:	:	:	:	:

Description

Cyclin B2 [Source:UniProtKB/TrEMBL;Acc:Q9XGI1]

Coordinates

chr2:+:46471786..46474602

Molecular Weight (calculated)

49348.5 Da

IEP (calculated)

6.300

GRAVY (calculated)

-0.297

Length

434 amino acids

Sequence
(BLAST)

001: MAITDENKHP LIKESSVRVK DRAEMATRKV VGVETRSNRR VLGAINQNLV GGQGYPCVVN KRGLSDGNGF CDKNLPVHGH RPITRKYAAQ IASSQKHSSE
101: ENKKPKIAAE SFSVWEDDME AANDKPVPMS LEQTEKVSKG KDQMTYIQEV EMEDIFEEAV IDIDGDDAKN HLAAVEYVGD LFANYRTMEV NSCASPYYMA
201: QQADINERMR SILIDWLIEV HHKFELREET LFLTVNLIDR FLEKQGIVRK KLQLVGLVAM LLACKYEEVC APLVEDLVLI SDKAYTRKEV LEMESMMLNT
301: LQFNMSVPTA YVFMRRYLKA AQCDRKLELL SFMLVELCLV EYEMLKFPPS FIAAAAIYTA QTTLYGVQQW SKTCEVHTTY SEDQLLECSR SIVGYHQKAA
401: TGKLTGVHRK YSISKFGYAA KCEPAHFLVQ QTQE

Best Arabidopsis Sequence Match ( AT1G76310.1 )
(BLAST)

001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L

Arabidopsis Description

CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.