Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048062 | Potato | nucleus | 97.68 | 97.68 |
| Solyc02g082820.2.1 | Tomato | nucleus | 75.41 | 74.88 |
| KRH76553 | Soybean | nucleus | 66.82 | 66.67 |
| KRH28901 | Soybean | nucleus | 66.13 | 65.82 |
| Solyc02g061650.1.1 | Tomato | nucleus | 51.04 | 62.68 |
| Solyc04g082430.2.1 | Tomato | nucleus | 56.84 | 62.34 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 30.16 | 59.91 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 56.61 | 58.1 |
| GSMUA_Achr11P... | Banana | nucleus | 54.76 | 57.84 |
| Solyc12g094600.1.1 | Tomato | nucleus | 56.38 | 57.18 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 56.15 | 57.08 |
| KXG20945 | Sorghum | nucleus | 54.06 | 54.95 |
| Os06t0726800-01 | Rice | nucleus | 53.13 | 54.65 |
| Zm00001d036360_P002 | Maize | nucleus | 53.36 | 54.25 |
| Os04t0563700-01 | Rice | mitochondrion | 51.51 | 52.86 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 51.28 | 52.62 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 49.42 | 52.59 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 51.04 | 52.51 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 49.42 | 52.08 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 50.58 | 52.03 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 50.58 | 52.03 |
| Zm00001d026129_P001 | Maize | nucleus | 50.58 | 51.17 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 32.95 | 51.08 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 49.42 | 50.59 |
| EES12664 | Sorghum | nucleus | 50.58 | 50.46 |
| Zm00001d002662_P010 | Maize | nucleus | 49.65 | 47.03 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 49.19 | 45.01 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 57.54 | 37.13 |
| Solyc10g078330.1.1 | Tomato | nucleus | 34.57 | 35.22 |
| Solyc01g009040.2.1 | Tomato | nucleus | 35.5 | 35.17 |
| Solyc10g080950.1.1 | Tomato | nucleus | 37.35 | 34.85 |
| Solyc06g073610.2.1 | Tomato | nucleus | 34.11 | 33.41 |
| Solyc04g078310.2.1 | Tomato | nucleus | 26.68 | 31.0 |
| Solyc12g088470.1.1 | Tomato | nucleus | 25.52 | 30.56 |
| Solyc12g088500.1.1 | Tomato | nucleus | 24.83 | 30.23 |
| Solyc12g088520.1.1 | Tomato | nucleus | 24.83 | 30.14 |
| Solyc12g088530.1.1 | Tomato | nucleus | 24.36 | 29.66 |
| Solyc10g049360.1.1 | Tomato | nucleus | 24.13 | 27.51 |
| Solyc03g120440.1.1 | Tomato | nucleus, plastid | 26.91 | 25.33 |
| Solyc06g065680.2.1 | Tomato | nucleus, plastid | 27.38 | 24.84 |
| Solyc11g005090.1.1 | Tomato | plastid | 26.91 | 23.67 |
| Solyc07g066660.2.1 | Tomato | nucleus | 32.25 | 18.81 |
Protein Annotations
| EnsemblPlants:Solyc03g032190.2.1 | EnsemblPlantsGene:Solyc03g032190.2 | Gene3D:1.10.472.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF261 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002767801 | UniProt:K4BFJ0 | MapMan:13.1.1.1.2 | : |
Description
No Description!
Coordinates
chr3:+:4690947..4694542
Molecular Weight (calculated)
49400.2 Da
IEP (calculated)
5.374
GRAVY (calculated)
-0.333
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSNENNPI MTKPTNGQEM GNRKFGVETR NNRRALGVIN QNFVGVNQYP CVVNKRGISE TNGICNKNPP IPAHRPITRK FAAQIASSQQ HYTEETKKPK
101: LAAESFSVWE DVPIIDVDEY EAAKDQPVPM SLEQTETVSH DNKTQMEIEM EDIFEETAID IDSDDAKNPL AAVDYVEDLY AYYSKMEVSS RISPDYMAQQ
201: FDVNERMRSI LIDWLIEVHH KFDLREETLF LTVSLIDRFL EKQSVVRKKL QLVGLVATLL ACKYEEVTLP VVDDLVFISD KAYERKEVLE LEKLMLNTLQ
301: FNMSVPTPYV FMRRFLKAAQ SDRKLELLSF FLIELCLVEY EMLKFPPSFI AAAAIYTAQC TLYSVKQWST TCELHTKYSE DQLLECSRLI VGFHKNAATG
401: KLTGVHRKYN TSKFGHAAKC EPAHFLLEQN Q
101: LAAESFSVWE DVPIIDVDEY EAAKDQPVPM SLEQTETVSH DNKTQMEIEM EDIFEETAID IDSDDAKNPL AAVDYVEDLY AYYSKMEVSS RISPDYMAQQ
201: FDVNERMRSI LIDWLIEVHH KFDLREETLF LTVSLIDRFL EKQSVVRKKL QLVGLVATLL ACKYEEVTLP VVDDLVFISD KAYERKEVLE LEKLMLNTLQ
301: FNMSVPTPYV FMRRFLKAAQ SDRKLELLSF FLIELCLVEY EMLKFPPSFI AAAAIYTAQC TLYSVKQWST TCELHTKYSE DQLLECSRLI VGFHKNAATG
401: KLTGVHRKYN TSKFGHAAKC EPAHFLLEQN Q
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Arabidopsis Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.