Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075380 | Potato | nucleus | 52.07 | 47.68 |
| CDY31481 | Canola | nucleus | 43.32 | 43.32 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 79.72 | 40.8 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 74.65 | 38.57 |
| GSMUA_Achr11P... | Banana | nucleus | 71.89 | 38.24 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 65.9 | 35.31 |
| PGSC0003DMT400093973 | Potato | nucleus | 53.46 | 35.15 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 65.9 | 34.96 |
| Os06t0726800-01 | Rice | nucleus | 66.36 | 34.37 |
| Os04t0563700-01 | Rice | mitochondrion | 65.9 | 34.05 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 65.9 | 33.97 |
| KXG20945 | Sorghum | nucleus | 66.36 | 33.96 |
| Solyc04g082430.2.1 | Tomato | nucleus | 61.29 | 33.84 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 64.52 | 33.41 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 64.52 | 33.41 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 64.52 | 33.33 |
| Zm00001d036360_P002 | Maize | nucleus | 64.98 | 33.25 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 64.06 | 33.17 |
| EES12664 | Sorghum | nucleus | 65.44 | 32.87 |
| Zm00001d026129_P001 | Maize | nucleus | 64.52 | 32.86 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 41.94 | 32.73 |
| KRH60628 | Soybean | nucleus | 60.37 | 32.35 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 63.13 | 32.31 |
| KRH76553 | Soybean | nucleus | 64.06 | 32.18 |
| KRH51329 | Soybean | nucleus, plastid | 61.29 | 32.05 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 64.98 | 31.97 |
| CDX85942 | Canola | nucleus | 59.91 | 31.86 |
| CDY29520 | Canola | nucleus | 59.45 | 31.46 |
| Bra025831.1-P | Field mustard | nucleus | 59.45 | 31.46 |
| KRH28901 | Soybean | nucleus | 62.67 | 31.41 |
| CDY33634 | Canola | nucleus | 58.99 | 31.37 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 38.25 | 31.32 |
| Bra016460.1-P | Field mustard | nucleus | 58.99 | 31.22 |
| CDX96631 | Canola | nucleus | 58.99 | 31.22 |
| CDX72551 | Canola | nucleus | 57.6 | 31.17 |
| Zm00001d002662_P010 | Maize | nucleus | 64.98 | 30.99 |
| Solyc12g094600.1.1 | Tomato | nucleus | 60.37 | 30.82 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 66.82 | 30.79 |
| Solyc02g061650.1.1 | Tomato | nucleus | 49.77 | 30.77 |
| Bra017726.1-P | Field mustard | nucleus | 57.14 | 30.54 |
| CDX88261 | Canola | nucleus | 60.37 | 30.47 |
| Solyc02g082820.2.1 | Tomato | nucleus | 60.83 | 30.41 |
| CDX87612 | Canola | nucleus | 60.37 | 30.39 |
| Bra015762.1-P | Field mustard | nucleus | 60.37 | 30.39 |
| PGSC0003DMT400048062 | Potato | nucleus | 60.37 | 30.39 |
| CDY67210 | Canola | nucleus | 56.68 | 30.3 |
| PGSC0003DMT400003868 | Potato | nucleus | 60.37 | 30.25 |
| Solyc03g032190.2.1 | Tomato | nucleus | 59.91 | 30.16 |
| AT1G20610.1 | Thale cress | nucleus | 59.45 | 30.07 |
| PGSC0003DMT400025854 | Potato | nucleus | 60.83 | 29.93 |
| Bra003727.1-P | Field mustard | nucleus | 52.07 | 29.5 |
| AT4G35620.1 | Thale cress | nucleus | 58.06 | 29.37 |
| CDY30357 | Canola | nucleus | 55.3 | 29.34 |
| Bra037265.1-P | Field mustard | nucleus | 54.84 | 29.1 |
| CDY26816 | Canola | nucleus | 54.38 | 28.99 |
| CDX68105 | Canola | nucleus | 52.53 | 28.86 |
| AT1G76310.3 | Thale cress | nucleus | 60.83 | 28.76 |
| AT2G17620.1 | Thale cress | nucleus | 56.22 | 28.44 |
| CDY07838 | Canola | nucleus | 54.38 | 28.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.71 | 28.19 |
| Bra024504.1-P | Field mustard | nucleus | 54.38 | 28.16 |
| CDY29184 | Canola | nucleus | 54.38 | 28.16 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 47.0 | 25.37 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 47.47 | 24.24 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 48.39 | 24.14 |
| GSMUA_Achr10P... | Banana | nucleus | 48.85 | 23.4 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 48.85 | 23.19 |
| GSMUA_Achr10P... | Banana | nucleus | 33.18 | 22.71 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 69.59 | 22.6 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 29.03 | 22.03 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 23.96 | 21.05 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 32.72 | 18.16 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 29.03 | 17.5 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 35.02 | 15.2 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 32.72 | 14.14 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 35.02 | 14.02 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P19270_001 | EnsemblPlants:GSMUA_Achr5T19270_001 | EnsemblPlantsGene:GSMUA_Achr5G19270_001 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | PFAM:PF00134 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0002968947 | UniProt:M0SZV6 | MapMan:13.1.1.1.2 | : |
Description
Cyclin-B2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19270_001]
Coordinates
chr5:+:20802420..20807423
Molecular Weight (calculated)
25306.0 Da
IEP (calculated)
5.159
GRAVY (calculated)
0.043
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDPTLFVDI IAETVPDIDI CDSNNPLAVV EYVEEIYNFY RQTEVNFDPP YMSHQFDINE KMRAILIDWL IEVHYKFELM EETLFLTVNI IDRFLARQTV
101: VRKKLQLVGV TAMLLACKYE EVSVPVVEDL VLISDRAYTR DEILEMERLI LNTLQFNMSV PTPYVFMRRF LKAADSDRKV KTFFCLGAKV GKHSTRAILV
201: GKRPPSSRER FDLAVVH
101: VRKKLQLVGV TAMLLACKYE EVSVPVVEDL VLISDRAYTR DEILEMERLI LNTLQFNMSV PTPYVFMRRF LKAADSDRKV KTFFCLGAKV GKHSTRAILV
201: GKRPPSSRER FDLAVVH
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Arabidopsis Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.