Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72551 | Canola | nucleus | 80.89 | 86.53 |
| CDY67210 | Canola | nucleus | 81.12 | 85.71 |
| Bra017726.1-P | Field mustard | nucleus | 80.65 | 85.22 |
| AT2G17620.1 | Thale cress | nucleus | 75.29 | 75.29 |
| KRH76553 | Soybean | nucleus | 61.31 | 60.88 |
| KRH28901 | Soybean | nucleus | 61.07 | 60.51 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 29.37 | 58.06 |
| PGSC0003DMT400093973 | Potato | nucleus | 43.82 | 56.97 |
| Solyc02g061650.1.1 | Tomato | nucleus | 46.15 | 56.41 |
| AT1G20610.1 | Thale cress | nucleus | 53.38 | 53.38 |
| GSMUA_Achr11P... | Banana | nucleus | 50.12 | 52.7 |
| Os06t0726800-01 | Rice | nucleus | 50.58 | 51.79 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 51.05 | 51.65 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 50.35 | 51.43 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 31.7 | 51.32 |
| KXG20945 | Sorghum | nucleus | 50.12 | 50.71 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 48.02 | 50.37 |
| Zm00001d026129_P001 | Maize | nucleus | 49.88 | 50.23 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 47.32 | 50.12 |
| Os04t0563700-01 | Rice | mitochondrion | 48.95 | 50.0 |
| Zm00001d036360_P002 | Maize | nucleus | 49.42 | 50.0 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 48.95 | 50.0 |
| EES12664 | Sorghum | nucleus | 50.12 | 49.77 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 31.93 | 49.28 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 48.25 | 49.17 |
| AT1G76310.3 | Thale cress | nucleus | 52.45 | 49.02 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 47.79 | 48.93 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 47.55 | 48.69 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 47.55 | 48.69 |
| Zm00001d002662_P010 | Maize | nucleus | 48.95 | 46.15 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 46.85 | 42.68 |
| AT3G11520.1 | Thale cress | nucleus | 37.53 | 38.89 |
| AT2G26760.1 | Thale cress | nucleus | 33.33 | 36.95 |
| AT5G06150.1 | Thale cress | nucleus | 35.66 | 34.38 |
| AT4G37490.1 | Thale cress | nucleus | 34.27 | 34.35 |
| AT1G47220.1 | Thale cress | nucleus | 25.87 | 33.95 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 51.05 | 32.78 |
| AT1G47210.2 | Thale cress | nucleus | 27.27 | 31.45 |
| AT1G77390.1 | Thale cress | plastid | 30.77 | 29.86 |
| AT5G43080.1 | Thale cress | nucleus | 24.48 | 29.58 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 25.17 | 29.19 |
| AT5G11300.1 | Thale cress | plastid | 27.74 | 27.29 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 27.51 | 26.22 |
| AT5G25380.4 | Thale cress | plastid | 26.81 | 25.96 |
| AT1G44110.1 | Thale cress | plastid | 27.74 | 25.87 |
| AT1G80370.1 | Thale cress | plastid | 27.27 | 25.38 |
| AT1G34460.5 | Thale cress | cytosol | 25.87 | 22.29 |
| AT1G16330.1 | Thale cress | nucleus | 32.87 | 21.76 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:829714 | ProteinID:AEE86541.1 | EMBL:AK226721 | ProteinID:ANM67659.1 |
| ArrayExpress:AT4G35620 | EnsemblPlantsGene:AT4G35620 | RefSeq:AT4G35620 | TAIR:AT4G35620 | RefSeq:AT4G35620-TAIR-G | EnsemblPlants:AT4G35620.1 |
| TAIR:AT4G35620.1 | ProteinID:CAA20032.1 | ProteinID:CAB80278.1 | Symbol:CYCB2;2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051301 | RefSeq:NP_001329476.1 | RefSeq:NP_195287.1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00292 | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF336 | UniProt:Q39070 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00000AAEA6 |
| EMBL:Z31401 | SEG:seg | : | : | : | : |
Description
CYCB2-2Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070]
Coordinates
chr4:+:16901596..16904001
Molecular Weight (calculated)
49789.6 Da
IEP (calculated)
4.830
GRAVY (calculated)
-0.423
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPEENNRN LVVKPITEIL QDDDKRSRKF GVEMKRQNRR ALGVINHNLV GAKAYPCVVN KRRGLSQRKQ ESCDKKKLDS LHPSISRSQE ETKKLKPSGN
101: EFGDCIFIDE EEEKNEEVTL DQPMPMSLEE PYIEFDPMEE EVEMEDMEEE QEEPVLDIDE YDANNSLAAV EYVQDLYDFY RKTERFSCVP LDYMAQQFDI
201: SDKMRAILID WLIEVHDKFE LMNETLFLTV NLIDRFLSKQ AVARKKLQLV GLVALLLACK YEEVSVPIVE DLVVISDKAY TRTDVLEMEK IMLSTLQFNM
301: SLPTQYPFLK RFLKAAQSDK KLEILASFLI ELALVDYEMV RYPPSLLAAT AVYTAQCTIH GFSEWNSTCE FHCHYSENQL LECCRRMVRL HQKAGTDKLT
401: GVHRKYSSSK FGYIATKYEA AHFLVSDSH
101: EFGDCIFIDE EEEKNEEVTL DQPMPMSLEE PYIEFDPMEE EVEMEDMEEE QEEPVLDIDE YDANNSLAAV EYVQDLYDFY RKTERFSCVP LDYMAQQFDI
201: SDKMRAILID WLIEVHDKFE LMNETLFLTV NLIDRFLSKQ AVARKKLQLV GLVALLLACK YEEVSVPIVE DLVVISDKAY TRTDVLEMEK IMLSTLQFNM
301: SLPTQYPFLK RFLKAAQSDK KLEILASFLI ELALVDYEMV RYPPSLLAAT AVYTAQCTIH GFSEWNSTCE FHCHYSENQL LECCRRMVRL HQKAGTDKLT
401: GVHRKYSSSK FGYIATKYEA AHFLVSDSH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.