Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032220.1-P | Field mustard | nucleus | 71.25 | 65.27 |
| CDY23653 | Canola | nucleus | 70.95 | 64.99 |
| AT1G47210.2 | Thale cress | nucleus | 72.17 | 63.44 |
| Bra040753.1-P | Field mustard | nucleus, plastid | 70.03 | 63.09 |
| CDY06757 | Canola | nucleus, plastid | 69.72 | 62.81 |
| CDY47596 | Canola | nucleus | 69.42 | 62.53 |
| CDY66770 | Canola | nucleus | 69.11 | 62.43 |
| Bra040793.1-P | Field mustard | nucleus | 69.11 | 62.26 |
| CDY17039 | Canola | nucleus | 68.5 | 61.71 |
| AT5G43080.1 | Thale cress | nucleus | 63.91 | 58.87 |
| KRH52056 | Soybean | nucleus | 36.7 | 56.87 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 63.3 | 55.95 |
| OQU91386 | Sorghum | nucleus | 44.65 | 55.94 |
| GSMUA_Achr10P... | Banana | nucleus | 49.85 | 51.42 |
| Solyc12g088530.1.1 | Tomato | nucleus | 53.21 | 49.15 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 54.43 | 48.77 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 42.51 | 48.6 |
| PGSC0003DMT400055428 | Potato | nucleus | 53.52 | 47.55 |
| Solyc04g078310.2.1 | Tomato | nucleus | 53.52 | 47.17 |
| KRH05614 | Soybean | nucleus | 52.29 | 46.59 |
| KRH15427 | Soybean | nucleus, plastid | 51.68 | 46.43 |
| KRH61375 | Soybean | nucleus | 45.87 | 45.87 |
| PGSC0003DMT400030222 | Potato | nucleus | 49.54 | 45.76 |
| KRH61369 | Soybean | nucleus | 45.57 | 45.57 |
| PGSC0003DMT400030176 | Potato | nucleus | 49.54 | 45.51 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 51.38 | 45.41 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 51.38 | 45.04 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 51.07 | 45.01 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 33.33 | 44.67 |
| Zm00001d033365_P002 | Maize | nucleus | 50.76 | 44.62 |
| TraesCS4A01G236700.2 | Wheat | plastid | 51.07 | 44.53 |
| Solyc12g088520.1.1 | Tomato | nucleus | 48.32 | 44.51 |
| KRH52055 | Soybean | nucleus | 48.32 | 44.13 |
| KRH61371 | Soybean | nucleus | 47.09 | 44.13 |
| KRH61373 | Soybean | nucleus, plastid | 50.15 | 43.73 |
| Solyc12g088470.1.1 | Tomato | nucleus | 48.01 | 43.61 |
| Solyc12g088500.1.1 | Tomato | nucleus | 47.09 | 43.5 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 51.38 | 42.97 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 46.79 | 42.5 |
| Zm00001d013744_P001 | Maize | nucleus | 45.57 | 41.74 |
| TraesCS5B01G078200.1 | Wheat | plastid | 46.79 | 40.58 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 46.48 | 40.21 |
| TraesCS5A01G072000.1 | Wheat | plastid | 46.18 | 40.16 |
| Os12t0581800-01 | Rice | nucleus, plastid | 45.57 | 38.7 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 39.14 | 37.32 |
| Zm00001d030849_P001 | Maize | nucleus | 47.71 | 36.88 |
| EES16237 | Sorghum | nucleus, plastid | 48.01 | 36.68 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 38.23 | 36.66 |
| EER95303 | Sorghum | nucleus, plastid | 41.9 | 35.96 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 41.59 | 35.79 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 47.71 | 35.7 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 40.98 | 35.64 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 40.98 | 35.26 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 45.87 | 33.04 |
| AT5G11300.1 | Thale cress | plastid | 43.12 | 32.34 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 40.98 | 32.29 |
| AT1G77390.1 | Thale cress | plastid | 41.59 | 30.77 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 42.2 | 30.67 |
| AT1G44110.1 | Thale cress | plastid | 42.51 | 30.22 |
| AT5G25380.4 | Thale cress | plastid | 40.67 | 30.02 |
| AT1G80370.1 | Thale cress | plastid | 41.9 | 29.72 |
| Os03t0208700-00 | Rice | nucleus | 35.17 | 28.12 |
| AT2G26760.1 | Thale cress | nucleus | 32.42 | 27.39 |
| Zm00001d048127_P001 | Maize | plastid | 38.53 | 26.3 |
| AT3G11520.1 | Thale cress | nucleus | 33.03 | 26.09 |
| AT4G35620.1 | Thale cress | nucleus | 33.95 | 25.87 |
| Os03t0607600-00 | Rice | nucleus | 47.09 | 25.33 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 20.18 | 24.91 |
| AT5G06150.1 | Thale cress | nucleus | 33.33 | 24.49 |
| AT4G37490.1 | Thale cress | nucleus | 31.5 | 24.07 |
| AT2G17620.1 | Thale cress | nucleus | 31.5 | 24.01 |
| AT1G20610.1 | Thale cress | nucleus | 29.97 | 22.84 |
| AT1G76310.3 | Thale cress | nucleus | 31.8 | 22.66 |
| AT1G16330.1 | Thale cress | nucleus | 29.05 | 14.66 |
| AT1G34460.5 | Thale cress | cytosol | 22.02 | 14.46 |
| Os03t0208800-00 | Rice | nucleus | 14.07 | 11.59 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | EntrezGene:841125 | UniProt:A0MEB5 | ProteinID:AAG52637.1 | ProteinID:AEE32139.1 |
| ArrayExpress:AT1G47220 | EnsemblPlantsGene:AT1G47220 | RefSeq:AT1G47220 | TAIR:AT1G47220 | RefSeq:AT1G47220-TAIR-G | EnsemblPlants:AT1G47220.1 |
| TAIR:AT1G47220.1 | Unigene:At.52047 | Symbol:CYCA3;3 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EMBL:DQ446333 | EMBL:DQ652884 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051301 | RefSeq:NP_175155.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PO:PO:0009005 | PO:PO:0025195 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00000A6625 | : | : |
Description
CYCA3-3Cyclin-A3-3 [Source:UniProtKB/Swiss-Prot;Acc:A0MEB5]
Coordinates
chr1:+:17303676..17305197
Molecular Weight (calculated)
38131.9 Da
IEP (calculated)
4.821
GRAVY (calculated)
-0.188
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKKDKQIH SDHNPQDASP VEWAEIRHKL LAFQENIQSG SDIDARSDDP QMCGLYVSDI YEYLRELEVK PKLRPLHDYI EKIQEDITPS KRGVLVDWLV
101: EVAEEFELVS ETLYLTVSYI DRFLSLKMVN EHWLQLVGVS AMFIASKYEE KRRPKVEDFC YITANTYTKQ DVLKMEEDIL LALEFELGRP TTNTFLRRFI
201: RVAQEDFKVP NLQLEPLCCY LSELSMLDYS CVKFVPSLLA ASAVFLARFI ILPNQHPWSQ MLEECTKYKA ADLQVCVEIM LDLYLSRSEG ASKAVREKYK
301: QHKFQYVAAI PVYQELPVTF WEDVVTI
101: EVAEEFELVS ETLYLTVSYI DRFLSLKMVN EHWLQLVGVS AMFIASKYEE KRRPKVEDFC YITANTYTKQ DVLKMEEDIL LALEFELGRP TTNTFLRRFI
201: RVAQEDFKVP NLQLEPLCCY LSELSMLDYS CVKFVPSLLA ASAVFLARFI ILPNQHPWSQ MLEECTKYKA ADLQVCVEIM LDLYLSRSEG ASKAVREKYK
301: QHKFQYVAAI PVYQELPVTF WEDVVTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.