Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040793.1-P | Field mustard | nucleus | 98.9 | 98.9 |
| CDY47596 | Canola | nucleus | 98.62 | 98.62 |
| CDY23653 | Canola | nucleus | 87.05 | 88.52 |
| CDY06757 | Canola | nucleus, plastid | 87.6 | 87.6 |
| CDY66770 | Canola | nucleus | 86.23 | 86.46 |
| AT1G47210.2 | Thale cress | nucleus | 81.54 | 79.57 |
| CDY06752 | Canola | nucleus | 59.78 | 76.14 |
| CDY22369 | Canola | nucleus | 68.32 | 70.66 |
| CDY17091 | Canola | nucleus | 68.59 | 69.55 |
| CDY17037 | Canola | nucleus, plastid | 69.42 | 69.23 |
| AT1G47220.1 | Thale cress | nucleus | 61.71 | 68.5 |
| CDY47595 | Canola | nucleus, plastid | 69.7 | 68.19 |
| KRH52056 | Soybean | nucleus | 35.81 | 61.61 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 60.61 | 60.27 |
| Solyc12g088530.1.1 | Tomato | nucleus | 55.37 | 56.78 |
| PGSC0003DMT400055428 | Potato | nucleus | 57.3 | 56.52 |
| GSMUA_Achr10P... | Banana | nucleus | 48.76 | 55.84 |
| Solyc04g078310.2.1 | Tomato | nucleus | 57.02 | 55.8 |
| PGSC0003DMT400030222 | Potato | nucleus | 54.27 | 55.65 |
| PGSC0003DMT400030176 | Potato | nucleus | 54.55 | 55.62 |
| OQU91386 | Sorghum | nucleus | 39.94 | 55.56 |
| KRH61375 | Soybean | nucleus | 49.86 | 55.35 |
| KRH15427 | Soybean | nucleus, plastid | 55.1 | 54.95 |
| KRH05614 | Soybean | nucleus | 54.55 | 53.95 |
| Solyc12g088520.1.1 | Tomato | nucleus | 52.34 | 53.52 |
| KRH61369 | Soybean | nucleus | 47.66 | 52.91 |
| Solyc12g088500.1.1 | Tomato | nucleus | 51.52 | 52.82 |
| Solyc12g088470.1.1 | Tomato | nucleus | 52.07 | 52.5 |
| KRH61371 | Soybean | nucleus | 50.14 | 52.15 |
| KRH52055 | Soybean | nucleus | 51.24 | 51.96 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 51.79 | 50.81 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 51.24 | 50.13 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 39.39 | 50.0 |
| KRH61373 | Soybean | nucleus, plastid | 51.52 | 49.87 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 51.24 | 49.87 |
| TraesCS4A01G236700.2 | Wheat | plastid | 51.24 | 49.6 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 53.17 | 49.36 |
| Zm00001d033365_P002 | Maize | nucleus | 49.86 | 48.66 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 46.83 | 47.22 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 49.04 | 47.09 |
| TraesCS5A01G072000.1 | Wheat | plastid | 48.76 | 47.07 |
| TraesCS5B01G078200.1 | Wheat | plastid | 48.76 | 46.95 |
| Os12t0581800-01 | Rice | nucleus, plastid | 48.76 | 45.97 |
| Zm00001d013744_P001 | Maize | nucleus | 44.35 | 45.1 |
| Zm00001d030849_P001 | Maize | nucleus | 50.41 | 43.26 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 28.65 | 42.62 |
| EES16237 | Sorghum | nucleus, plastid | 50.14 | 42.52 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 49.04 | 40.73 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 41.6 | 40.16 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 41.6 | 39.74 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 41.05 | 39.21 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 49.04 | 39.21 |
| EER95303 | Sorghum | nucleus, plastid | 41.05 | 39.11 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 22.59 | 38.86 |
| CDY61993 | Canola | nucleus | 40.22 | 38.73 |
| CDY48212 | Canola | nucleus | 39.94 | 38.46 |
| CDY41784 | Canola | plastid | 34.99 | 37.35 |
| CDY53304 | Canola | plastid | 41.6 | 36.92 |
| CDX88368 | Canola | plastid | 38.57 | 36.84 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 34.44 | 36.44 |
| CDX87520 | Canola | nucleus | 38.29 | 36.01 |
| CDX81722 | Canola | nucleus, plastid | 39.94 | 35.98 |
| CDY31481 | Canola | nucleus | 21.49 | 35.94 |
| CDX92090 | Canola | mitochondrion, nucleus | 34.99 | 35.57 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 33.33 | 35.48 |
| CDY36574 | Canola | mitochondrion, nucleus | 42.15 | 35.09 |
| CDX87087 | Canola | plastid | 40.22 | 35.01 |
| CDX85466 | Canola | plastid | 40.5 | 34.83 |
| CDY66415 | Canola | nucleus | 41.32 | 34.56 |
| CDX96836 | Canola | nucleus, plastid | 41.87 | 34.55 |
| CDX79389 | Canola | plastid | 40.22 | 33.72 |
| CDY02719 | Canola | plastid | 39.67 | 33.57 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 38.29 | 33.49 |
| CDX67944 | Canola | plastid | 39.67 | 33.33 |
| CDY65994 | Canola | plastid | 39.67 | 32.51 |
| CDY25649 | Canola | plastid | 38.84 | 32.27 |
| CDY39984 | Canola | plastid | 39.67 | 32.14 |
| CDY38664 | Canola | nucleus, plastid | 40.22 | 32.09 |
| CDY37592 | Canola | mitochondrion, plastid | 40.22 | 31.95 |
| CDX97090 | Canola | nucleus | 38.29 | 31.88 |
| CDX87305 | Canola | plastid | 39.94 | 31.39 |
| CDX69768 | Canola | nucleus, plastid | 37.19 | 30.89 |
| CDY62475 | Canola | nucleus | 29.2 | 30.2 |
| CDY69551 | Canola | nucleus | 29.2 | 29.86 |
| CDX72551 | Canola | nucleus | 31.68 | 28.68 |
| CDY29184 | Canola | nucleus | 33.06 | 28.64 |
| CDY67210 | Canola | nucleus | 31.96 | 28.57 |
| Zm00001d048127_P001 | Maize | plastid | 37.47 | 28.39 |
| Os03t0607600-00 | Rice | nucleus | 47.38 | 28.29 |
| CDX80988 | Canola | plastid | 33.33 | 28.27 |
| CDY26816 | Canola | nucleus | 31.68 | 28.26 |
| CDY11354 | Canola | plastid | 33.61 | 28.18 |
| CDY30357 | Canola | nucleus | 31.68 | 28.12 |
| CDY07838 | Canola | nucleus | 32.23 | 27.99 |
| CDX96631 | Canola | nucleus | 30.85 | 27.32 |
| CDY33634 | Canola | nucleus | 30.3 | 26.96 |
| CDX85942 | Canola | nucleus | 30.03 | 26.72 |
| Os03t0208700-00 | Rice | nucleus | 30.03 | 26.65 |
| CDY29520 | Canola | nucleus | 29.48 | 26.1 |
| CDX87612 | Canola | nucleus | 30.85 | 25.99 |
| CDX88261 | Canola | nucleus | 30.58 | 25.81 |
| CDX69311 | Canola | nucleus | 29.2 | 25.3 |
| CDX68105 | Canola | nucleus | 27.27 | 25.06 |
| CDX75659 | Canola | nucleus | 29.2 | 24.77 |
| CDY14091 | Canola | plastid | 31.96 | 17.68 |
| CDY33338 | Canola | nucleus | 27.55 | 17.12 |
| CDY04980 | Canola | nucleus | 32.23 | 16.3 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 27.27 | 16.26 |
| CDX96819 | Canola | nucleus | 27.27 | 15.35 |
| CDX83953 | Canola | nucleus | 27.0 | 14.96 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 39.94 | 14.66 |
| Os03t0208800-00 | Rice | nucleus | 13.77 | 12.59 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078FVG3 | UniProt:A0A078FVG3 | EnsemblPlants:CDY17039 | ProteinID:CDY17039 |
| ProteinID:CDY17039.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00095010001 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EE57B7 | : | : | : |
Description
BnaA08g04030DBnaA08g04030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVG3]
Coordinates
chrLK032069:-:427031..429029
Molecular Weight (calculated)
41527.8 Da
IEP (calculated)
8.878
GRAVY (calculated)
-0.163
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEKEICLRM TRAAVKRKST ATEDERVTKK RVVLGELPNL SNISVLSNFN QIPKPAKSLG ALLRKTAPVA LAAVEFGSDI DARSDDPKMC GPYVSDIYEY
101: LRQMEVKPKQ RPLPDYMEKV QKDVTPTMRG VLVDWLVEVA DEYKLLSETL HLTVSYIDRF LSLKTVNKKR LQLLGVSAML IASKYEEISP PKVEDFCYIT
201: DNTFSKQDVV KMEADILLTL QFELGRPAIS SFIRRFTRVA QEDFNVPHLQ LEPLSCYLSE LSILDYKAVK FLPSMLAASA VFLARFIIRP KQHPWNQMLE
301: EYTKYKAADL QECVGIIHDL YLRRRGGALQ AVRDKYKHHK FQCVATMPVS PVLPVTFWED VTI
101: LRQMEVKPKQ RPLPDYMEKV QKDVTPTMRG VLVDWLVEVA DEYKLLSETL HLTVSYIDRF LSLKTVNKKR LQLLGVSAML IASKYEEISP PKVEDFCYIT
201: DNTFSKQDVV KMEADILLTL QFELGRPAIS SFIRRFTRVA QEDFNVPHLQ LEPLSCYLSE LSILDYKAVK FLPSMLAASA VFLARFIIRP KQHPWNQMLE
301: EYTKYKAADL QECVGIIHDL YLRRRGGALQ AVRDKYKHHK FQCVATMPVS PVLPVTFWED VTI
001: MTEQEICVRV TRAAAKRKAS TAMGIDGDRV NKKRVVLGEL LNVSNVNLLA NLNQKKETQK PKRNLKPPPA KQIKSAPVAI IDLESKSDID SRSDDPQMCG
101: PYVADIYEYL RQLEVKPKQR PLPDYIEKVQ KDVTPSMRGV LVDWLVEVAE EYKLGSETLY LTVSHIDRFL SLKTVNKQKL QLVGVSAMLI ASKYEEISPP
201: KVDDFCYITD NTFSKQDVVK MEADILLALQ FELGRPTINT FMRRFTRVAQ DDFKVPHLQL EPLCCYLSEL SILDYKTVKF VPSLLAASAV FLARFIIRPK
301: QHPWNQMLEE YTKYKAADLQ VCVGIIHDLY LSRRGGALQA VREKYKHHKF QCVATMPVSP ELPVTFWEDV TI
101: PYVADIYEYL RQLEVKPKQR PLPDYIEKVQ KDVTPSMRGV LVDWLVEVAE EYKLGSETLY LTVSHIDRFL SLKTVNKQKL QLVGVSAMLI ASKYEEISPP
201: KVDDFCYITD NTFSKQDVVK MEADILLALQ FELGRPTINT FMRRFTRVAQ DDFKVPHLQL EPLCCYLSEL SILDYKTVKF VPSLLAASAV FLARFIIRPK
301: QHPWNQMLEE YTKYKAADLQ VCVGIIHDLY LSRRGGALQA VREKYKHHKF QCVATMPVSP ELPVTFWEDV TI
Arabidopsis Description
CYCA3-2Cyclin-A3-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.