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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37592 Canola mitochondrion, plastid 96.7 96.28
CDX79389 Canola plastid 79.78 83.83
CDX67944 Canola plastid 79.34 83.56
CDY39984 Canola plastid 81.32 82.59
CDX87305 Canola plastid 82.64 81.39
AT1G80370.1 Thale cress plastid 80.22 79.18
CDY48212 Canola nucleus 64.18 77.45
CDY61993 Canola nucleus 63.96 77.19
CDY66415 Canola nucleus 67.03 70.28
CDY53304 Canola plastid 62.86 69.93
CDY36574 Canola mitochondrion, nucleus 66.59 69.5
CDX81722 Canola nucleus, plastid 61.1 68.98
CDX96836 Canola nucleus, plastid 66.37 68.64
GSMUA_Achr1P14000_001 Banana nucleus, plasma membrane, plastid 34.73 63.97
VIT_09s0002g05240.t01 Wine grape nucleus 58.24 54.08
KRH47513 Soybean nucleus 54.07 51.68
KRH44391 Soybean nucleus 51.87 50.11
PGSC0003DMT400006576 Potato nucleus 49.89 49.03
Solyc03g120440.1.1 Tomato nucleus, plastid 48.79 48.47
CDX87087 Canola plastid 44.18 48.2
CDY06752 Canola nucleus 30.11 48.07
CDX97090 Canola nucleus 45.27 47.25
CDX69768 Canola nucleus, plastid 44.62 46.45
Os12t0502300-01 Rice nucleus, plastid 48.13 44.69
OQU77084 Sorghum nucleus 47.69 44.47
CDY22369 Canola nucleus 34.29 44.44
TraesCS5D01G121100.2 Wheat plastid 47.91 42.91
TraesCS5B01G114300.2 Wheat plastid 47.69 42.8
TraesCSU01G054300.1 Wheat nucleus 47.03 42.71
CDY17091 Canola nucleus 33.41 42.46
Zm00001d014756_P006 Maize nucleus, plastid 48.57 42.42
TraesCS3A01G523600.1 Wheat plastid 47.25 42.41
TraesCS5A01G108500.2 Wheat plastid 47.25 42.32
TraesCS3D01G529100.1 Wheat plastid 46.81 42.18
CDY17037 Canola nucleus, plastid 33.63 42.03
HORVU3Hr1G114440.21 Barley nucleus, plastid 46.59 41.81
GSMUA_Achr3P25340_001 Banana nucleus 49.45 41.51
CDY47595 Canola nucleus, plastid 33.63 41.24
CDX88368 Canola plastid 34.29 41.05
CDY66770 Canola nucleus 32.53 40.88
CDY62408 Canola nucleus, plasma membrane, plastid 18.9 40.76
CDY23653 Canola nucleus 31.87 40.62
KXG23504 Sorghum mitochondrion, nucleus 43.08 40.58
CDX85466 Canola plastid 37.58 40.52
CDY47596 Canola nucleus 32.09 40.22
CDY17039 Canola nucleus 32.09 40.22
CDY06757 Canola nucleus, plastid 32.09 40.22
CDX87520 Canola nucleus 34.07 40.16
Zm00001d023732_P002 Maize mitochondrion, nucleus, plastid 42.42 39.79
CDY02719 Canola plastid 37.14 39.39
CDY41784 Canola plastid 28.79 38.53
CDY31481 Canola nucleus 18.02 37.79
CDY65994 Canola plastid 36.48 37.47
CDY25649 Canola plastid 35.6 37.07
CDX92090 Canola mitochondrion, nucleus 29.01 36.97
CDX72551 Canola nucleus 26.59 30.17
CDX85942 Canola nucleus 26.59 29.66
CDY67210 Canola nucleus 26.37 29.56
CDY33634 Canola nucleus 26.15 29.17
CDX96631 Canola nucleus 26.15 29.02
CDY30357 Canola nucleus 25.71 28.61
CDY62475 Canola nucleus 21.98 28.49
CDY69551 Canola nucleus 22.2 28.45
CDY26816 Canola nucleus 25.27 28.26
CDY29184 Canola nucleus 25.93 28.16
CDY29520 Canola nucleus 25.27 28.05
CDY07838 Canola nucleus 25.71 27.99
CDX68105 Canola nucleus 23.96 27.59
CDX88261 Canola nucleus 25.93 27.44
CDX87612 Canola nucleus 25.93 27.38
CDX69311 Canola nucleus 23.74 25.78
CDY11354 Canola plastid 24.18 25.4
CDX80988 Canola plastid 23.52 25.0
CDX75659 Canola nucleus 23.52 25.0
CDY19803 Canola golgi, nucleus, plasma membrane, plastid 44.62 20.53
CDY33338 Canola nucleus 25.49 19.86
CDY35083 Canola cytosol, endoplasmic reticulum, nucleus 25.05 18.72
CDX96819 Canola nucleus 25.05 17.67
CDX83953 Canola nucleus 24.4 16.95
CDY14091 Canola plastid 23.74 16.46
CDY04980 Canola nucleus 24.18 15.32
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.1GO:A0A078HMT0UniProt:A0A078HMT0EnsemblPlants:CDY38664ProteinID:CDY38664
ProteinID:CDY38664.1InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_NGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634EnsemblPlantsGene:GSBRNA2T00066388001PFAM:PF00134PFAM:PF02984
PIRSF:PIRSF001771PANTHER:PTHR10177PANTHER:PTHR10177:SF346SMART:SM00385SMART:SM01332SUPFAM:SSF47954
UniParc:UPI0004EEB69ESEG:seg::::
Description
BnaC02g23150DBnaC02g23150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMT0]
Coordinates
chrLK032429:+:130110..133073
Molecular Weight (calculated)
50999.1 Da
IEP (calculated)
8.634
GRAVY (calculated)
-0.238
Length
455 amino acids
Sequence
(BLAST)
001: MVKEKAVSGN TTIPLYARPV TRALASALRA SSKLITSSDV AAITLINQGM VLRANSKRTA LDDRTTNAPK KRAVLKDISN VTCENSYTTS CVSAAKTQVE
101: NVKQIEKGRA GSSKVAPSST TSEVTDNAKS QVVSDSAGVS LSGCTGRNEA SCSFSRLPPR PPVRSTSSTV ETSSPKFIDI DSDVKDPLLC SLYAPEIHYN
201: LRVAELKRRP CPDFMERTQR DVTQTMRGIL VDWLVEVSEE YTLVPDTLYL TVYLIDWFLQ GNYMERQRLQ LLGVTCMLIA SKYEEINAPR IEEFCSITDN
301: TYTRDAVLEM ESQVLKHFSF QIYTPTSKTF LRRFLRAAQA SHLMPSVEME FLANYLTELT LVEYEFLKYL PSVIAASAVF LAKWTVNQSS HPWNPTLEHY
401: TTYKASDLKA CVEALQELQL NTKGCPLNSI RMKYRQDKFK SVAVFTSPKI PDRLF
Best Arabidopsis Sequence Match ( AT1G80370.1 )
(BLAST)
001: MGKENAVSGN SIPIHGRPVT RALASALRAS SKLITSSEVA ATTQNQGRVL RAKSKRTALD EKKANAPKKR AVLKDITNVT CENSYTSCFS VAVENIKQIK
101: KGRQSSSSSK VASSSATSQV TDAKVEVVSN SAGASLSVFT DTSLGTNETS YSIIAKPSSR SPPRPFGTVE RSCGGASSPK FVDIDSDDKD PLLCSLYAPD
201: IYYNLRVAEL KRRPFPDFME KTQRDVTETM RGILVDWLVE VSEEYTLVPD TLYLTVYLID WFLHGNYVER QRLQLLGITC MLIASKYEEI HAPRIEEFCF
301: ITDNTYTRDQ VLEMESQVLK HFSFQIYTPT SKTFLRRFLR AAQVSFPNQS LEMEFLANYL TELTLMDYPF LKFLPSIIAA SAVFLAKWTL NQSSHPWNPT
401: LEHYTTYKAS DLKASVHALQ DLQLNTKGCS LNSIRMKYRQ DKFKSVAVFS SGELPDKLFI S
Arabidopsis Description
CYCA2-4Cyclin-A2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C968]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.