Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65994 | Canola | plastid | 97.25 | 95.94 |
| CDX85466 | Canola | plastid | 78.72 | 81.52 |
| CDY02719 | Canola | plastid | 79.18 | 80.65 |
| AT1G44110.1 | Thale cress | plastid | 79.41 | 75.43 |
| Os05t0237100-01 | Rice | extracellular | 27.92 | 61.93 |
| KRH53279 | Soybean | plastid | 61.33 | 55.83 |
| KRH64625 | Soybean | plastid | 61.78 | 55.79 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 61.33 | 54.14 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 43.94 | 54.08 |
| Zm00001d032128_P001 | Maize | cytosol | 19.22 | 53.16 |
| CDX88368 | Canola | plastid | 46.22 | 53.16 |
| CDX87520 | Canola | nucleus | 46.91 | 53.11 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 25.4 | 52.61 |
| CDY41784 | Canola | plastid | 40.73 | 52.35 |
| Os12t0298950-00 | Rice | nucleus | 53.09 | 51.9 |
| KRH17986 | Soybean | plastid | 58.58 | 50.89 |
| Solyc11g005090.1.1 | Tomato | plastid | 56.98 | 50.82 |
| PGSC0003DMT400015424 | Potato | plastid | 54.23 | 50.21 |
| KRH16410 | Soybean | plastid | 57.67 | 50.0 |
| Os01t0233100-00 | Rice | nucleus, plastid | 55.84 | 49.69 |
| CDX92090 | Canola | mitochondrion, nucleus | 40.05 | 49.02 |
| Os01t0233500-01 | Rice | nucleus, plastid | 56.75 | 48.82 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 55.38 | 48.4 |
| TraesCS3B01G183400.1 | Wheat | plastid | 56.29 | 48.24 |
| TraesCS3D01G164600.1 | Wheat | plastid | 56.06 | 48.04 |
| TraesCS3A01G157000.1 | Wheat | plastid | 56.29 | 47.95 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 54.46 | 47.41 |
| Zm00001d040381_P001 | Maize | plastid | 57.21 | 46.9 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 49.89 | 45.7 |
| CDY06752 | Canola | nucleus | 29.75 | 45.61 |
| KXG21616 | Sorghum | nucleus, plastid | 47.37 | 43.22 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 50.11 | 42.94 |
| CDY22369 | Canola | nucleus | 33.18 | 41.31 |
| CDY61993 | Canola | nucleus | 35.47 | 41.11 |
| CDY48212 | Canola | nucleus | 35.47 | 41.11 |
| CDY17091 | Canola | nucleus | 33.41 | 40.78 |
| CDY17037 | Canola | nucleus, plastid | 33.41 | 40.11 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 18.31 | 40.0 |
| CDY23653 | Canola | nucleus | 32.49 | 39.78 |
| CDY66770 | Canola | nucleus | 32.72 | 39.5 |
| CDY06757 | Canola | nucleus, plastid | 32.72 | 39.39 |
| CDY47595 | Canola | nucleus, plastid | 33.41 | 39.35 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 47.14 | 39.24 |
| CDY47596 | Canola | nucleus | 32.49 | 39.12 |
| CDY17039 | Canola | nucleus | 32.27 | 38.84 |
| CDY31481 | Canola | nucleus | 18.99 | 38.25 |
| CDY53304 | Canola | plastid | 35.7 | 38.14 |
| CDX81722 | Canola | nucleus, plastid | 35.01 | 37.97 |
| CDX96836 | Canola | nucleus, plastid | 36.84 | 36.59 |
| CDX87087 | Canola | plastid | 34.55 | 36.21 |
| CDY39984 | Canola | plastid | 37.07 | 36.16 |
| CDX79389 | Canola | plastid | 35.7 | 36.03 |
| CDX69768 | Canola | nucleus, plastid | 35.93 | 35.93 |
| CDX67944 | Canola | plastid | 35.47 | 35.88 |
| CDX97090 | Canola | nucleus | 35.7 | 35.78 |
| CDY66415 | Canola | nucleus | 35.47 | 35.71 |
| CDY38664 | Canola | nucleus, plastid | 37.07 | 35.6 |
| Zm00001d010404_P001 | Maize | nucleus | 39.36 | 35.46 |
| CDY37592 | Canola | mitochondrion, plastid | 37.07 | 35.45 |
| CDY36574 | Canola | mitochondrion, nucleus | 35.24 | 35.32 |
| CDX87305 | Canola | plastid | 36.84 | 34.85 |
| CDY62475 | Canola | nucleus | 24.03 | 29.91 |
| CDY69551 | Canola | nucleus | 24.26 | 29.86 |
| CDX96631 | Canola | nucleus | 27.23 | 29.02 |
| CDX72551 | Canola | nucleus | 26.54 | 28.93 |
| CDY33634 | Canola | nucleus | 26.77 | 28.68 |
| CDX85942 | Canola | nucleus | 26.77 | 28.68 |
| CDY29520 | Canola | nucleus | 26.77 | 28.54 |
| CDY67210 | Canola | nucleus | 26.32 | 28.33 |
| CDX69311 | Canola | nucleus | 26.77 | 27.92 |
| CDX68105 | Canola | nucleus | 24.94 | 27.59 |
| CDX75659 | Canola | nucleus | 27.0 | 27.57 |
| CDX88261 | Canola | nucleus | 27.0 | 27.44 |
| CDX87612 | Canola | nucleus | 27.0 | 27.38 |
| CDY29184 | Canola | nucleus | 26.09 | 27.21 |
| CDY07838 | Canola | nucleus | 25.86 | 27.03 |
| CDY26816 | Canola | nucleus | 24.94 | 26.78 |
| CDY30357 | Canola | nucleus | 24.94 | 26.65 |
| CDY11354 | Canola | plastid | 26.32 | 26.56 |
| CDX80988 | Canola | plastid | 25.86 | 26.4 |
| CDY33338 | Canola | nucleus | 23.8 | 17.81 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 23.8 | 17.08 |
| CDY14091 | Canola | plastid | 24.94 | 16.62 |
| CDX96819 | Canola | nucleus | 23.8 | 16.12 |
| CDX83953 | Canola | nucleus | 23.34 | 15.57 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 34.78 | 15.37 |
| CDY04980 | Canola | nucleus | 24.71 | 15.04 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078GK71 | UniProt:A0A078GK71 | EnsemblPlants:CDY25649 | ProteinID:CDY25649 |
| ProteinID:CDY25649.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00032949001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004EE9042 | SEG:seg | : | : | : |
Description
BnaC05g25280DBnaC05g25280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GK71]
Coordinates
chrLK032178:-:39338..41602
Molecular Weight (calculated)
49509.7 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.363
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTNQNRRP SFTSSVKPIS NTAVMAKKRA PLGNITNQKN ESQIPNSSVY FAHCSNKSAK LKQAPTQPVC VNATSLLCEQ TQASSSSKSD DESMSIDETK
101: STCDSYKSPR VEYIDNEDVS IERKAFSNLY ITPSSETTNV NYCRKYVLSE MENNDADPQL CPTFACDIYN HLRAAEAKKR PAVDYMETVQ KDVNSSMRGI
201: LVDWLVEVSE EYRLVPETLY LTVNYIDRYL SGNVISRHKL QLLGVACMMV AAKYEEICAP QVEEFCYITD NTYLKDEVLD MESAVLNYLK FEMSASTAKC
301: FLRRFFRAAH GVNEAPCMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLATYILDPT RRPWNSTLQH YTQYGAMELR GCVKDLQRFC SNAHVSTLPA
401: VRDKYSQHKY KFVAKKFCPS IIPPEFFNNS CIDQFSN
101: STCDSYKSPR VEYIDNEDVS IERKAFSNLY ITPSSETTNV NYCRKYVLSE MENNDADPQL CPTFACDIYN HLRAAEAKKR PAVDYMETVQ KDVNSSMRGI
201: LVDWLVEVSE EYRLVPETLY LTVNYIDRYL SGNVISRHKL QLLGVACMMV AAKYEEICAP QVEEFCYITD NTYLKDEVLD MESAVLNYLK FEMSASTAKC
301: FLRRFFRAAH GVNEAPCMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLATYILDPT RRPWNSTLQH YTQYGAMELR GCVKDLQRFC SNAHVSTLPA
401: VRDKYSQHKY KFVAKKFCPS IIPPEFFNNS CIDQFSN
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.