CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74764
CDX95663
CDY18902
CDY27361
CDY37063
CDY53895

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07300.1	CDX74764	AT2G45760.1	17631528
AT5G07300.1	CDX95663	AT2G45760.1	17631528
AT5G07300.1	CDY18902	AT2G45760.1	17631528
AT5G07300.1	CDY27361	AT2G45760.1	17631528
AT5G07300.1	CDY37063	AT2G45760.1	17631528
AT5G07300.1	CDY53895	AT2G45760.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005931.1-P	Field mustard	cytosol	100.0	100.0
CDX81044	Canola	cytosol	97.96	97.96
CDX70026	Canola	cytosol	92.33	92.02
CDX98984	Canola	cytosol	91.14	91.14
AT5G07300.1	Thale cress	cytosol	90.46	90.61
CDX98983	Canola	cytosol, plastid	37.48	89.8
CDY00235	Canola	cytosol	79.39	80.34
CDX86951	Canola	cytosol	78.71	79.66
VIT_17s0000g00210.t01	Wine grape	cytosol	71.72	73.09
KRH41052	Soybean	endoplasmic reticulum	68.31	69.14
Solyc03g118200.2.1	Tomato	cytosol	67.29	68.1
KRH54085	Soybean	cytosol	66.27	67.3
GSMUA_AchrUn_...	Banana	cytosol, golgi, plastid	49.57	66.44
KRH20017	Soybean	cytosol	30.83	66.3
Solyc06g068840.2.1	Tomato	cytosol	64.91	66.03
KRH63871	Soybean	cytosol	65.25	61.58
CDY22660	Canola	cytosol	58.43	59.04
Os02t0521300-01	Rice	plasma membrane	58.6	58.9
CDY06335	Canola	cytosol	57.75	58.15
Zm00001d016615_P002	Maize	plasma membrane	53.66	57.9
KXG30293	Sorghum	cytosol	56.9	57.79
TraesCS6B01G235200.1	Wheat	plastid	56.73	57.71
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	56.39	57.67
TraesCS6A01G189800.1	Wheat	cytosol	56.05	57.32
HORVU6Hr1G041140.14	Barley	mitochondrion	56.56	51.55
CDY27584	Canola	cytosol	10.9	27.59
CDY50776	Canola	cytosol	3.07	24.32
CDX84957	Canola	cytosol	14.48	22.08
CDX99619	Canola	cytosol	2.56	22.06
CDY56212	Canola	plastid	16.35	21.77
CDX84471	Canola	cytosol, mitochondrion	13.46	21.76
CDY01855	Canola	cytosol, plastid	16.18	21.54
CDY43775	Canola	cytosol, mitochondrion	13.46	21.53
CDY31343	Canola	cytosol	13.29	21.25
CDY39835	Canola	cytosol	13.29	21.25
CDY49066	Canola	cytosol	16.52	21.09
CDY37509	Canola	cytosol	16.52	21.09
CDX91935	Canola	cytosol	16.18	20.79
CDX85597	Canola	cytosol, plastid	15.84	20.62
CDX70564	Canola	cytosol, plastid	16.52	20.59
CDX74310	Canola	cytosol	16.01	20.52
CDY09854	Canola	nucleus, plastid	16.18	20.39
CDX69581	Canola	nucleus, plastid	16.18	20.39
CDX78576	Canola	cytosol, plastid	16.35	20.38
CDX91062	Canola	cytosol, plastid	15.67	20.35
CDX79314	Canola	cytosol, plastid	13.12	20.32
CDX67997	Canola	cytosol	12.95	20.11
CDX85680	Canola	mitochondrion, plastid	4.94	19.73
CDX87387	Canola	plastid	13.46	19.65
CDX88533	Canola	plastid	13.46	19.6
CDY52873	Canola	plastid	9.71	18.63
CDX72278	Canola	plastid	10.22	16.17
CDY03984	Canola	cytosol	3.92	7.74
CDY49067	Canola	extracellular	1.87	7.33
CDY27585	Canola	cytosol	1.53	6.92
CDY25816	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	GO:A0A078CNE0	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	EnsemblPlants:CDX78287	ProteinID:CDX78287	ProteinID:CDX78287.1	InterPro:Copine	GO:GO:0003674
GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987
GO:GO:0060548	EnsemblPlantsGene:GSBRNA2T00129634001	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465
PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108
SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	UniParc:UPI000253F6BC	InterPro:VWF_A
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

BnaA03g01990D

Coordinates

chrLK031815:+:12883..16972

Molecular Weight (calculated)

64279.3 Da

IEP (calculated)

5.008

GRAVY (calculated)

-0.129

Length

587 amino acids

Sequence
(BLAST)

001: MGSCWSDGSG RGGGMVGVGG NTSSSAAAAA YASPNDAVDY YLKSRGFNGL FSQIELSFSA SNLRDMDVTS KSDAMVVVYT KGRDGTLAES FRSEVVLNSL
101: NPKWIKKFNI RYQFEVVQTL LFRIYDIDTQ FQNSKEEMLK LDEQQFLGEA TCTLSEVITK PNRTIALELT RKEGTQPQNH GKLIVHAEES LASKTTTEIV
201: FRCLNLESMD HFSKSDPFLV ISKIVEHGSP IPVSKTEVLK NDANPVWKPV SLSVQQVGSK DTPLVIECLD FNGNGNHNLI GKVQKSLADL EKLHLSGQGI
301: NLFLPTGVGH KHEDKALKSQ LFVDKFTETV QHTFLEYLAS GFELNFMVAI DFTASNGNPR LPDSLHYIDP TGRLNAYQRA IVEVGEVLQF YDTDKRFPAW
401: GFGARPIDIP VSHCFNLNGS STYCEVDGIQ GIMNAYNGAL FNVSFAGPTL FGPVINAAAT IASESLAQNA KRYYVLLIIT DGVITDLQET KDALVSASDL
501: PLSILIVGVG GADYKEMEVL DGDKGERLES SSGRVASRDI VQFVALRDMQ YGEVSVVEAL LAELPSQFLT YMRNRNITPT SITTSAS

Best Arabidopsis Sequence Match ( AT5G07300.1 )
(BLAST)

001: MGSCWSDGSY AGGGMVGVGG GANSSAATPN DAVDYYLKSR GYNGLFSQIE LSFSASNLRD RDVISKSDAM VVVYTKGRDG TLAELFRSEV VLNSLNPKWI
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST

Arabidopsis Description

BON2Protein BONZAI 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5S1W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.