Factsheet for TraesCS6D01G176800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G189800.1	Wheat	cytosol	98.95	98.95
TraesCS6B01G235200.1	Wheat	plastid	98.43	97.92
HORVU6Hr1G041140.14	Barley	mitochondrion	96.34	85.87
Os02t0521300-01	Rice	plasma membrane	87.28	85.79
KXG30293	Sorghum	cytosol	83.97	83.39
Zm00001d016615_P002	Maize	plasma membrane	77.35	81.62
GSMUA_AchrUn_...	Banana	cytosol, golgi, plastid	49.83	65.3
VIT_17s0000g00210.t01	Wine grape	cytosol	64.81	64.58
KRH41052	Soybean	endoplasmic reticulum	61.85	61.21
KRH54085	Soybean	cytosol	60.98	60.55
KRH20017	Soybean	cytosol	28.57	60.07
Solyc03g118200.2.1	Tomato	cytosol	60.1	59.48
CDX98983	Canola	cytosol, plastid	24.56	57.55
AT5G61900.3	Thale cress	cytosol	57.67	57.27
Solyc06g068840.2.1	Tomato	cytosol	57.14	56.85
CDX78287	Canola	cytosol	57.67	56.39
Bra005931.1-P	Field mustard	cytosol	57.67	56.39
KRH63871	Soybean	cytosol	60.8	56.11
Bra029301.1-P	Field mustard	cytosol, plastid	56.62	55.94
CDX81044	Canola	cytosol	57.14	55.88
CDY00235	Canola	cytosol	56.45	55.86
Bra010041.1-P	Field mustard	cytosol	56.45	55.86
CDX98984	Canola	cytosol	56.97	55.71
AT5G07300.1	Thale cress	cytosol	56.45	55.29
CDX70026	Canola	cytosol	56.62	55.18
Bra009273.1-P	Field mustard	cytosol	56.45	55.01
CDX86951	Canola	cytosol	55.57	55.0
TraesCS1D01G236200.1	Wheat	cytosol	52.44	51.02
TraesCS6D01G057900.2	Wheat	cytosol	52.09	50.68
AT5G61910.4	Thale cress	cytosol	57.67	24.59
TraesCS5D01G378400.2	Wheat	endoplasmic reticulum, extracellular	12.2	21.54
TraesCS3D01G510000.1	Wheat	cytosol	12.72	21.22
TraesCS7D01G377500.1	Wheat	plastid	16.38	20.7
TraesCS7D01G377600.1	Wheat	plastid	16.2	20.35
TraesCS3D01G408900.1	Wheat	cytosol	15.68	19.31
TraesCS7D01G305600.1	Wheat	mitochondrion	13.41	18.97
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.03	17.13
TraesCS3D01G509900.2	Wheat	cytosol	13.41	16.08

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	Gene3D:3.40.50.410	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150
GO:GO:0008219	GO:GO:0008289	GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035
InterPro:IPR035892	InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108
SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	EnsemblPlantsGene:TraesCS6D01G176800	EnsemblPlants:TraesCS6D01G176800.1
InterPro:VWF_A	TIGR:cd04047	TIGR:cd04048	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chr6D:-:174618777..174635981

Molecular Weight (calculated)

62964.0 Da

IEP (calculated)

4.993

GRAVY (calculated)

-0.139

Length

574 amino acids

Sequence
(BLAST)

001: MGNCCSDEMG AGRHSVGPAA SSADAASAVA DRFLRSRGAG ASTQIELSLS ASNLGDQEYF FKSNPIVVVY SSNDGALEEI GRTEVIVNSS SPSWNAKIIL
101: QYQFEVLQPL VFHIYDIDPQ FHEVGEKMLK LEEQQFLGEA ICNLSDVITK QNRLFTLKLG VSEHNLPNPS KFGELTVQAE ESAGSKALME MVFHCSDLEI
201: KDLLSKSDPF LLISRMSENG TPVPICKTEV RKNDLNPKWK PVIMNLQQVG SKENPLMIEC FNFSSNGKHD LVGKIVKSVA ELENMYHSGN GENFFVPASN
301: AHDCHSKEVL KSQVYVEKYL ENSRHTFIDY ISAGCQLNLM VAIDYTASNG NPRLPDSLHY IDPSGRPNAY QRVILEIGDI LQYYDPAKRI PSWGYGARPI
401: DGPVSHCFNL NGSTYQPEVE GIQGIMSAYI SALRNVSLAG PTLFGPLLST ATAIASQSLT SNQQKYFILL IVTDGVVTDF QETIDAIIKA SDFPLSIIVV
501: GVGGADFKEM EFLDPNKGGR LESSTGRVAS RDVIQFAPMK DVHGTGISIV QSLLAEVPGQ FMTYMRTREI QAIS

Best Arabidopsis Sequence Match ( AT5G61900.1 )
(BLAST)

001: MGNCCSDVAS GAGATAGVGG SGSSAALGAT NDALDYYLKS KGFNGLFSQI ELSFSASNLR DRDVLSKSDP MVVVYQKEKD ATLSEVFRSE VVLNSLAPKW
101: IKKFIVAYHF ETVQTLVFRV YDVDTKFQNS REEMLKLDEQ QFLGEATCAL SEIITKSTRT STLELKRKDG FAPQAQPHHG KLIIHAEESL ASKISTEIVF
201: RCSNLESKDL FSKSDPFLVV SKIVEHGTPI PVSKTEVRKN DLNPIWKPVF LSVQQVGSKD SPVIIECSDF NSNGKHSLIG KVQKSLSDLE KLHLAGQGIN
301: FSLPTGAGQN KVLKSQLFVD KFTETVHHTF LEYLASGFEL NFMVAIDFTA SNGNPRLPDS LHYIDPSGRL NAYQRAIMDV GEVLQFYDSD KRFPAWGFGA
401: RPIDAPVSHC FNLNGSSSYS EVDGIQGIMT SYTSALFNVS LAGPTLFGPV INAAAMIASA SLAQGSRKYY VLLIITDGVI TDLQETKDAL VSASDLPLSI
501: LIVGVGGADF KEMEILDADK GERLESSSGR LASRDIVQFV ALRDVQYGEI SVVQALLAEL PSQFLTYMRI RNMKPIPP

Arabidopsis Description

BON1Protein BONZAI 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.