Factsheet for TraesCS7D01G377500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G381200.1	Wheat	cytosol, plastid	93.17	95.92
TraesCS7B01G283100.1	Wheat	cytosol	91.41	93.68
TraesCS7D01G377600.1	Wheat	plastid	89.21	88.62
Os06t0608800-02	Rice	nucleus	80.62	81.88
KXG20338	Sorghum	nucleus	77.75	78.97
Zm00001d046554_P003	Maize	cytosol, plastid	76.21	77.75
GSMUA_Achr2P05470_001	Banana	nucleus	63.0	76.47
Zm00001d036831_P006	Maize	cytosol	73.13	72.49
KRH07106	Soybean	cytosol, plastid	39.21	61.17
VIT_00s0780g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	55.73	57.89
TraesCS3D01G408900.1	Wheat	cytosol	57.05	55.58
TraesCS7D01G305600.1	Wheat	mitochondrion	48.68	54.43
TraesCS3D01G510000.1	Wheat	cytosol	40.75	53.78
KRH07102	Soybean	cytosol	16.08	52.14
TraesCS5D01G378400.2	Wheat	endoplasmic reticulum, extracellular	35.68	49.85
CDY49067	Canola	extracellular	16.08	48.67
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	55.07	46.55
Bra012681.1-P	Field mustard	cytosol	11.01	44.64
Bra018339.1-P	Field mustard	cytosol	13.22	40.54
TraesCS3D01G509900.2	Wheat	cytosol	42.29	40.08
CDY03984	Canola	cytosol	17.84	27.27
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	20.7	16.38
TraesCS6D01G057900.2	Wheat	cytosol	21.15	16.27
TraesCS1D01G236200.1	Wheat	cytosol	20.7	15.93

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857
PANTHER:PTHR10857:SF28	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7D01G377500
EnsemblPlants:TraesCS7D01G377500.1	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:488784699..488789533

Molecular Weight (calculated)

50254.7 Da

IEP (calculated)

7.152

GRAVY (calculated)

-0.511

Length

454 amino acids

Sequence
(BLAST)

001: MEKKAPKPSY NSAYGYGNSS TRSNSRYATA PLGLSPWYAS SAGNNVQQPE AQATLQRKYS RIGDDYRTVA QVTEALAQAG LESSNLIVGI DFTKSNQWTG
101: KNSYNRRCLH DIGRTPNPYE QAISIIGRTL SDFDEDNLIP CFGFGDASTH DKDVFSFYPE NRPCTGFEEA LERYRQIVPT LRLSGPTSFA PIIETAIGIV
201: DSTGGQYHVL LIIADGQVTR NVDTQSGQLS PQEWDTINAI VKASHFPLSI VLVGVGDGPW DMMHKFDDNI PARSFDNFQF VNFTEIMSKS IAADRKEAEF
301: ALSALMEIPT QYKATLDLQL LGRRQGIPPR VPLPPPARTA YSRSASFDQQ AGVYSRSSGF GQQTSGFQQS DSFKQRQHGA TRRPDSYSSE SSQPAVTRTP
401: DTYASESTFS CAICMDKSKD LAFGCGHQTC YDCGEKLVRC PMCQKHITTR IRLY

Best Arabidopsis Sequence Match ( AT1G67800.4 )
(BLAST)

001: MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV
101: TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI
201: IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID
301: PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM
401: AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.