Factsheet for TraesCS7B01G283100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G377500.1	Wheat	plastid	93.68	91.41
TraesCS7A01G381200.1	Wheat	cytosol, plastid	90.97	91.38
TraesCS7B01G283200.1	Wheat	cytosol	91.2	88.6
Os06t0608800-02	Rice	nucleus	80.59	79.87
KXG20338	Sorghum	nucleus	77.65	76.96
Zm00001d046554_P003	Maize	cytosol, plastid	76.3	75.96
GSMUA_Achr2P05470_001	Banana	nucleus	62.3	73.8
Zm00001d036831_P006	Maize	cytosol	72.69	70.31
TraesCS7B01G134400.1	Wheat	cytosol	57.11	63.41
KRH07106	Soybean	cytosol, plastid	40.18	61.17
VIT_00s0780g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	57.11	57.89
TraesCS3B01G566800.1	Wheat	cytosol	47.86	55.94
TraesCS3B01G449200.1	Wheat	cytosol	58.01	55.03
TraesCS5B01G111900.1	Wheat	cytosol	29.8	54.77
KRH07102	Soybean	cytosol	16.48	52.14
TraesCS5B01G371300.1	Wheat	endoplasmic reticulum, vacuole	36.12	50.47
TraesCS7B01G208900.1	Wheat	mitochondrion	47.63	50.24
CDY49067	Canola	extracellular	16.25	48.0
Bra012681.1-P	Field mustard	cytosol	10.84	42.86
TraesCS3B01G566700.1	Wheat	cytosol	42.44	38.68
Bra018339.1-P	Field mustard	cytosol	12.87	38.51
CDY03984	Canola	cytosol	17.38	25.93
TraesCS6B01G235200.1	Wheat	plastid	20.77	15.94
TraesCS6B01G074300.2	Wheat	cytosol	20.99	15.76
TraesCS1B01G247700.2	Wheat	cytosol	20.77	15.59

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857
PANTHER:PTHR10857:SF28	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7B01G283100
EnsemblPlants:TraesCS7B01G283100.1	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:517312612..517320661

Molecular Weight (calculated)

48989.0 Da

IEP (calculated)

5.851

GRAVY (calculated)

-0.523

Length

443 amino acids

Sequence
(BLAST)

001: MEQKDPKSSY NSAYRYGNSS TGSNSRYATA PPGFSPWYAS SAGNNVQQPE AQALQRKYSR IGDDYCSVAQ VTEALAQAGL ESSNLIVGMD FTKSNEWTGK
101: NSYNRHCLHD IGRTPNPYEQ AISIIGRTLS DFDEDNLIPC FGFGDASTHD KDVFSFYPED RPCTGFEEAL ERYRQIVPAL RLSGPTSFAP IIETAIGIVD
201: STGGQYHVLL IIADGQVARN VDTQSGQLSP QEWDTINAIV KASHFPLSIV LVGVGDGPWD MMHKFDDNIP ARSFDNFQFV NFTEIMSKSI AADRKEAEFA
301: LSALMEIPTQ YKATLDLQLL GRRQGIPPRV PLPPPTRTAY SRSSGFGQQT RGFQQSDSFK QRQHGATRRP DSYSSESSQP AATRIPDTYA SESSESTLSC
401: AICTDKSKDL AFGCGHQTCY DCGQNLVRCP MCQQHITTRI RLY

Best Arabidopsis Sequence Match ( AT3G01650.1 )
(BLAST)

001: MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY

Arabidopsis Description

RGLG1E3 ubiquitin-protein ligase RGLG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.