Factsheet for TraesCS7B01G283200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G381300.1	Wheat	plastid	98.68	98.47
TraesCS7D01G377600.1	Wheat	plastid	98.46	98.25
TraesCS7B01G283100.1	Wheat	cytosol	88.6	91.2
Os06t0608800-02	Rice	nucleus	86.4	88.14
KXG20338	Sorghum	nucleus	83.99	85.68
Zm00001d046554_P003	Maize	cytosol, plastid	82.46	84.49
GSMUA_Achr2P05470_001	Banana	nucleus	66.01	80.48
Zm00001d036831_P006	Maize	cytosol	79.17	78.82
TraesCS7B01G134400.1	Wheat	cytosol	58.99	67.42
KRH07106	Soybean	cytosol, plastid	39.91	62.54
VIT_00s0780g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	58.11	60.64
TraesCS3B01G449200.1	Wheat	cytosol	59.43	58.03
TraesCS5B01G111900.1	Wheat	cytosol	30.04	56.85
TraesCS3B01G566800.1	Wheat	cytosol	46.49	55.94
KRH07102	Soybean	cytosol	16.23	52.86
TraesCS7B01G208900.1	Wheat	mitochondrion	47.59	51.67
TraesCS5B01G371300.1	Wheat	endoplasmic reticulum, vacuole	35.53	51.1
CDY49067	Canola	extracellular	16.45	50.0
Bra012681.1-P	Field mustard	cytosol	10.53	42.86
Bra018339.1-P	Field mustard	cytosol	12.5	38.51
TraesCS3B01G566700.1	Wheat	cytosol	40.79	38.27
CDY03984	Canola	cytosol	17.32	26.6
TraesCS6B01G235200.1	Wheat	plastid	20.83	16.46
TraesCS1B01G247700.2	Wheat	cytosol	21.05	16.27
TraesCS6B01G074300.2	Wheat	cytosol	20.83	16.1

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857
PANTHER:PTHR10857:SF28	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7B01G283200
EnsemblPlants:TraesCS7B01G283200.1	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:517323684..517328147

Molecular Weight (calculated)

50465.6 Da

IEP (calculated)

6.058

GRAVY (calculated)

-0.567

Length

456 amino acids

Sequence
(BLAST)

001: MGQKDSKPSY NSADYGNSSN GYNSRYANMP SSYSPRYASS AGNNVQQPEA QARLQRKYSR IGDDYRSVSQ VTEALAQAGL ESSNLIVGID FTKSNEWTGK
101: ISYNRRCLHD IGNTPNPYEQ AISIIGRTLS AFDEDNLIPC FGFGDASTHD QEVFSFYPEN QPCNGFEEAL ERYREIVPTL RLAGPTSFAP IIETAIGIAD
201: STGGQYHVLL IIADGQVTRS VDTQSGQLSP QERDTIDAIV KASHFPLSIV LVGVGDGPWD MMHKFDDNIP ARSFDNFQFV NFTEIMSKSI AADRKEAEFA
301: LSALMEIPTQ YKATLDLQLL GRRQGIPPRV PLPPPTRTHY SRSTSFDQQS GVYSRSSSFG QQTSGFQQSD SFKQRQHGAT RRPDSYSSES SQPAASRIPD
401: TYASESSEST LSCAICMDKS KDLAFGCGHQ TCYDCGKNLV RCPMCQQHIT TRIRLY

Best Arabidopsis Sequence Match ( AT3G01650.1 )
(BLAST)

001: MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY

Arabidopsis Description

RGLG1E3 ubiquitin-protein ligase RGLG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.