Factsheet for TraesCS1B01G247700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G236100.4	Wheat	cytosol	98.98	98.98
TraesCS1D01G236200.1	Wheat	cytosol	97.8	97.8
TraesCS6B01G074300.2	Wheat	cytosol	92.88	92.88
HORVU1Hr1G058000.10	Barley	cytosol	94.92	84.72
Os05t0373300-01	Rice	plasma membrane	82.2	81.38
KXG21864	Sorghum	cytosol	80.17	80.85
Zm00001d037872_P001	Maize	plasma membrane	78.47	78.61
GSMUA_Achr5P08050_001	Banana	cytosol	69.32	68.86
Solyc10g045500.1.1	Tomato	cytosol	14.58	67.19
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	10.85	66.67
VIT_14s0030g00550.t01	Wine grape	cytosol	53.56	66.11
VIT_14s0030g00540.t01	Wine grape	cytosol	51.19	65.94
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.64	65.48
VIT_14s0030g00600.t01	Wine grape	cytosol	57.46	65.19
VIT_14s0030g00500.t01	Wine grape	cytosol	64.58	64.14
VIT_12s0121g00080.t01	Wine grape	cytosol	64.24	63.7
CDY22660	Canola	cytosol	61.69	62.65
CDY06335	Canola	cytosol	61.36	62.09
KRH68626	Soybean	cytosol	60.85	61.9
Bra031645.1-P	Field mustard	cytosol	61.02	61.75
AT1G08860.1	Thale cress	cytosol	60.68	61.3
KRH68625	Soybean	cytosol	60.68	60.58
KRG96891	Soybean	cytosol	60.68	60.27
VIT_14s0030g00570.t01	Wine grape	cytosol	64.75	57.27
TraesCS6B01G235200.1	Wheat	plastid	51.53	52.69
TraesCS5B01G371300.1	Wheat	endoplasmic reticulum, vacuole	12.71	23.66
TraesCS7B01G134400.1	Wheat	cytosol	15.42	22.81
TraesCS3B01G449200.1	Wheat	cytosol	17.12	21.63
TraesCS7B01G208900.1	Wheat	mitochondrion	15.25	21.43
TraesCS3B01G566800.1	Wheat	cytosol	13.56	21.11
TraesCS7B01G283200.1	Wheat	cytosol	16.27	21.05
TraesCS7B01G283100.1	Wheat	cytosol	15.59	20.77
TraesCS5B01G111900.1	Wheat	cytosol	6.95	17.01
TraesCS3B01G566700.1	Wheat	cytosol	13.05	15.84

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219
GO:GO:0008289	GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892
InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857
PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	EnsemblPlantsGene:TraesCS1B01G247700
EnsemblPlants:TraesCS1B01G247700.2	InterPro:VWF_A	TIGR:cd01459	TIGR:cd04047	TIGR:cd04048	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:438176247..438183021

Molecular Weight (calculated)

65016.4 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.186

Length

590 amino acids

Sequence
(BLAST)

001: MGGCFSGDVR GGMEAVGGGA RGAAAAVQGQ GQGGPNEAVD HFFQGQALRL YTPLELSFSA SKLRNMDALS KSDPMLVVYT KMDGRLEEIG RTEVILNSLE
101: PLWITKAMIN YQFEIVQPLV FRIYDVDTKY HNTPLKMLNL AQQDFLGEAF CNLSEIVTKF NHSLTLNLRN GSGHALQGTV TVHAEETASS RMAVDMQFHC
201: LNLDNKDTFS KSDPFLRVSR LSESAVAIPI CKTEVIKNNL NPIWRPITLT SQQYSSKDDP LLVECFDFDA SGNHELIGSL QTTIAQLENL YNSKAGANFY
301: SHKGQKKLKG QLFLDKFQEK VQHTFLDYIS SGFELNFMVA VDFTASNGDP RVPQSLHYID PSGRPNSYQQ AILGVSEVLQ FYDNDRRFPA WGFGAKIPRG
401: SVSHCFNLNA STNDCEVVGV EGIMSAYSST LYSVSLAGPT LFGPVISKAA EIASHSVQYA NNKYFVLLII TDGVITDQQE TKDSIVRASD LPLSILIVGV
501: GNADFTQMRI LDADFGKRLE SSTGRVATRD IVQFVPMREV QAGGQVTVVQ SLLEELPGQF LEYMRTRDIK PRPPQHASAP PAYHPPPPQL

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.